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Taxonomy browser (Aliivibrio fischeri)

Aliivibrio fischeri

Taxonomy ID: 668 (for references in articles please use NCBI:txid668)
current name
Aliivibrio fischeri (Beijerinck 1889) Urbanczyk et al. 2007
type strain of Aliivibrio fischeri: ATCC:7744, CAIM:329, CCUG:13450, CIP:103206, DSM:507, BCCM/LMG:4414, NCCB:76033, NCCB:80039, NCIMB:1281, NRRL:B-761, BCRC:12900, JCM:11803, JCM:18803
homotypic synonym:
"Bacillus fischeri" (Beijerinck 1889) Trevisan 1889, effective name 1)
"Photobacterium fischeri" Beijerinck 1889, effective name 2)
"Bacterium phosphorescens indigenus" (Eisenberg 1891) Chester 1897, effective name 3)
"Microspira fischeri" (Beijerinck 1889) Chester 1901, effective name 4)
"Achromobacter fischeri" (Beijerinck 1889) Bergey et al. 1930, effective name 5)
Photobacterium fischeri (Beijerinck 1889) Reichelt and Baumann 1973 (Approved Lists 1980), nom. approb. 6)
Vibrio fischeri (Beijerinck 1889) Lehmann and Neumann 1896 (Approved Lists 1980), nom. approb. 7)
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Einheimischer Leuchtbacillus" Fischer 1888
heterotypic synonym
"Bacillus phosphorescens indigenus" Eisenberg 1891, effective name 8)
heterotypic synonym
"Microspira marina" (Russell 1892) Migula 1900, effective name 9)
heterotypic synonym
"Vibrio noctiluca" Weisglass and Skreb 1963, effective name 10)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 29,842 8,571 773
Protein 167,740 147,118 -
Structure 37 11 -
Genome 1 1 -
Popset 95 95 -
GEO Datasets 92 67 -
PubMed Central 3,689 3,689 -
Gene 28,328 11,858 -
SRA Experiments 849 315 -
Protein Clusters 3,982 3,982 -
Identical Protein Groups 99,281 98,307 -
BioProject 69 45 -
BioSample 524 372 4
Assembly 85 71 -
PubChem BioAssay 65 62 -
Taxonomy 15 1 -

Notes:

Comments and References:

image:Aliivibrio fischeri
Vibrio fischeri = Photobacterium fischeri
Vibrio fischeri and Photobacterium fischeri are homotypic synonyms.
Hendrie MS et al. (1970)
Hendrie, M.S., Hodgkiss, W., and Shewan, J.M. "The identification, taxonomy and classification of luminous bacteria." J. Gen. Microbiol. (1970) 64:151-169. [No PubMed record available.]
Skerman VBD et al. (1980) (Photobacterium fischeri)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
Skerman VBD et al. (1980) (Vibrio fischeri)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
Urbanczyk H et al. (2007)
Urbanczyk, H., Ast, J.C., Higgins, M.J., Carson, J., and Dunlap, P.V. "Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov." Int. J. Syst. Evol. Microbiol. (2007) 57:2823-2829.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Aliivibrio fischeri meta-databases BacDive
2 records from this provider organism-specific BioCyc
Photobacterium fischeri (Beijerinck 1889) Reichelt and Baumann 1973 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 9 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Vibrio fischeri culture/stock collections Global Catalogue of Microorganisms
24 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
Aliivibrio fischeri (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Photobacterium fischeri (Beijerinck, 1889) Reichelt & Baumann, 1973 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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