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Taxonomy browser (Vibrio cholerae)

Vibrio cholerae

Taxonomy ID: 666 (for references in articles please use NCBI:txid666)
Scientific name: Vibrio cholerae Pacini 1854
type strain of Vibrio cholerae: ATCC 14035
type strain of Vibrio cholerae: CCUG 9118 A
type strain of Vibrio cholerae: CECT 514
type strain of Vibrio cholerae: CIP 62.13
type strain of Vibrio cholerae: NCTC 8021
Inherited blast name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
synonym: "Liquidivibrio cholerae" (Pacini 1854) Orla-Jensen 1909 1)
synonym: "Vibrio comma" (Schroeter 1886) Blanchard 1906 1)
synonym: "Vibrio cholerae-asiaticae" (Trevisan 1884) Pfeiffer 1896 1)
synonym: "Spirillum cholerae" (Pacini 1854) Mac1889 1)
synonym: "Microspira comma" Schroeter 1886 1)
synonym: "Pacinia cholerae-asiaticae" (Trevisan 1884) Trevisan 1885 1)
synonym: "Spirillum cholerae-asiaticae" (Trevisan 1884) Zopf 1885 1)
synonym: "Bacillo virgola del Koch" Trevisan 1884 1)
synonym: "Bacillus cholerae" (Pacini 1854) Trevisan 1884 1)
synonym: "Bacillus cholerae-asiaticae" Trevisan 1884 1)
synonym: "Kommabacillus" Koch 1884 1)
synonym: "Vibrio cholera" (sic) Pacini 1854 1)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
   Entrez records   
Database name Subtree links Direct links
Nucleotide 240,619 156,857
Protein 2,596,985 1,906,856
Structure 515 234
Genome 1 1
Popset 299 286
Conserved Domains 8 7
GEO Datasets 973 890
PubMed Central 15,887 15,887
Gene 43,152 173
SRA Experiments 7,301 5,781
Protein Clusters 5,560 5,560
Bio Project 623 356
Bio Sample 7,558 6,203
Bio Systems 3,557 1,086
Assembly 1,030 653
Probe 251 229
PubChem BioAssay 275 253
Taxonomy 284 1

Notes:

Comments and References:

Nota BeneLapage SP et al. (1992) (reference with type strain information)
Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R., and Clark, W.A. "International Code of Nomenclature of Bacteria (1990 revision)." American Society for Microbiology, Washington, D.C. (1992). [No PubMed record available.]

Reference to PubMed documentNandi S et al. (1997)
Nandi, S., Khetawat, G., Sengupta, S., Majumder, R., Kar, S., Bhadra, R.K., Roychoudhury, S., and Das, J. "Rearrangements in the genomes of Vibrio cholerae strains belonging to different serovars and biovars." Int. J. Syst. Bacteriol. (1997) 47:858-862.

Nota BeneSkerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]


External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Vibrio cholerae meta-databases BacDive
11 records from this provider organism-specific BioCyc
dryaddb supplemental materials Dryad Digital Repository
Vibrio cholerae Pacini 1854 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
41 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Vibrio cholerae culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
237 records from this provider organism-specific Integrated Microbial Genomes
Vibrio cholerae taxonomy/phylogenetic Lifemap
Vibrio cholerae (taxon passport) culture/stock collections StrainInfo
4 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
TIGR companies/research institutes The Institute for Genomic Research
Vibrio cholerae taxonomy/phylogenetic TreeBase
Vibrio cholerae Pacini, 1854 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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