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Taxonomy browser (Triticum aestivum)

Triticum aestivum

Taxonomy ID: 4565 (for references in articles please use NCBI:txid4565)
Scientific name: Triticum aestivum
current: Triticum aestivum
Genbank common name: bread wheat
Inherited blast name: monocots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
synonym: Triticum aestivum subsp. aestivum
synonym: Triticum vulgare
 
current: Triticum vulgare
 
current: Triticum vulgare
common name: Canadian hard winter wheat
common name: common wheat
common name: wheat
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,030,154 1,030,029
Nucleotide EST 1,409,493 1,409,493
Nucleotide GSS 63,301 63,301
Protein 27,561 27,289
Structure 69 69
Genome 1 1
Popset 353 353
Conserved Domains 1 1
GEO Datasets 3,738 3,738
UniGene 178,464 178,464
PubMed Central 9,671 9,671
Gene 2,285 2,285
SRA Experiments 12,694 12,693
Protein Clusters 78 78
Identical Protein Groups 19,672 19,635
Bio Project 641 640
Bio Sample 10,784 10,783
Assembly 22 22
Clone DB 10,131 10,131
Probe 21,871 21,871
PubChem BioAssay 398 398
Taxonomy 7 1

Comments and References:

Nota BeneWheat classification tables

Nota BeneTROPICOS (Oct 19, 2009)
Name verified on 19 October 2009, in: Tropicos.org. Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at: http://www.tropicos.org/

Nota BeneSoreng RJ et al. 2003 & on
Soreng RJ, G Davidse, PM Peterson, FO Zuloaga, EJ Judziewicz, TS Filgueiras & O Morrone 2003 and onwards. On-line taxonomic novelties and updates, distributional additions and corrections, and editorial changes since the four published volumes of the Catalogue of New World Grasses (Poaceae) published in Contributions from the United States National Herbarium Vols. 39, 41, 46, and 48. Internet Catalogue of New World Grasses http://www.tropicos.org/Project/CNWG


Genome Information

Go to NCBI genomic BLAST page for Triticum aestivum
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND SHOTGUN ALL
PURDUE - Purdue University, Genomics Facility
- 74,261 74,261
WUGSC - Washington University, Genome Sequencing Center
354 - 354
Totals per type
354 74,261 74,615

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Triticum aestivum taxonomy taxonomy/phylogenetic Arctos Specimen Database
Triticum aestivum images images Bioimages.vanderbilt.edu
Triticum aestivum L. taxonomy/phylogenetic Encyclopedia of life
14 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Triticum aestivum L. taxonomy/phylogenetic Integrated Taxonomic Information System
Triticum aestivum taxonomy/phylogenetic Lifemap
2 records from this provider taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Triticum aestivum taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
2 records from this provider taxonomy/phylogenetic The International Plant Names Index
3 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Triticum aestivum organism-specific WebScipio - eukaryotic gene identification
4 records from this provider organism-specific diArk - a resource for eukaryotic genome research
2 records from this provider taxonomy/phylogenetic electronic Plant Information Centre
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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