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Taxonomy browser (Candidatus Amoebophilus asiaticus 5a2)

Candidatus Amoebophilus asiaticus 5a2

Taxonomy ID: 452471 (for references in articles please use NCBI:txid452471)
Scientific name: Candidatus Amoebophilus asiaticus 5a2, candidatus name 1)
Inherited blast name: CFB group bacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
equivalent name: Candidatus Amoebophilus asiaticus str. 5a2, candidatus name 1)
equivalent name: Candidatus Amoebophilus asiaticus strain 5a2, candidatus name 1)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus; Candidatus Amoebophilus asiaticus
   Entrez records   
Database name Direct links
Nucleotide 5
Protein 2,655
Genome 1
PubMed Central 4
Gene 1,900
SRA Experiments 1
Identical Protein Groups 1,467
Bio Project 2
Bio Sample 2
Bio Systems 88
Assembly 1
Taxonomy 1


Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentSchmitz-Esser S et al. (2010)
Schmitz-Esser, S., Tischler, P., Arnold, R., Montanaro, J., Wagner, M., Rattei, T., and Horn, M. "The genome of the amoeba symbiont 'Candidatus Amoebophilus asiaticus' reveals common mechanisms for host cell interaction among amoeba-associated bacteria." J. Bacteriol. (2010) 192:1045-1057.

Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
JGI - Joint Genome Institute, U.S. Department of Energy
20,817 20,817
Totals per type
20,817 20,817

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Candidatus Amoebophilus asiaticus5a2 organism-specific BioCyc
GOLD: Go0000935 organism-specific Genomes On Line Database
642555114: Candidatus Amoebophilus asiaticus 5a2 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

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