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Taxonomy browser (Xanthomonas perforans)

Xanthomonas perforans

Taxonomy ID: 442694 (for references in articles please use NCBI:txid442694)
current name
Xanthomonas perforans Jones et al. 2006
type strain of Xanthomonas perforans: personal::XV938, ATCC:BAA-983, DSM:18975, ICMP:16690, NCPPB:4321
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic genbank synonym
Xanthomonas euvesicatoria pv. perforans (Jones et al. 2006) Constantin et al. 2016
heterotypic synonym
Xanthomonas axonopodis pv. vesicatoria
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 61,616 61,607 36
Protein 601,310 597,217 -
Genome 1 1 -
Popset 100 100 -
PubMed Central 117 117 -
Gene 13,599 13,599 -
SRA Experiments 419 419 -
Protein Clusters 876 876 -
Identical Protein Groups 51,130 51,008 -
Bio Project 50 49 -
Bio Sample 539 537 2
Assembly 438 436 1
Taxonomy 2 1 -

Comments and References:

Constantin EC et al. (2016)
Constantin, E.C., Cleenwerck, I., Maes, M., Baeyen, S., Van Malderghem, C., De Vos, P., and Cottyn, B. "Genetic characterization of strains named as Xanthomonas axonopodis pv. dieffenbachiae leads to a taxonomic revision of the X. axonopodis species complex." Plant Pathol. (2016) 65:792-806. [No PubMed record available.]
Jones JB et al. (1998)
Jones, J.B., Stall, R.E., and Bouzar, H. "Diversity among xanthomonads pathogenic on pepper and tomato." Ann. Rev. Phytopathol. (1998) 36:41-58. [No PubMed record available.]
Jones JB et al. (2000)
Jones, J.B., Bouzar, H., Stall, R.E., Almira, E.C., Roberts, P.D., Bowen, B.W., Sudberry, J., Strickler, P.M., and Chun, J. "Systematic analysis of xanthomonads (Xanthomonas spp.) associated with pepper and tomato lesions." Int. J. Syst. Evol. Microbiol. (2000) 50:1211-1219.
Jones JB et al. (2004)
Jones, J.B., Lacy, G.H., Bouzar, H., Stall, R.E., and Schaad, N.W. "Reclassification of the xanthomonads associated with bacterial spot disease of tomato and pepper." Syst. Appl. Microbiol. (2004) 27:755-762. [Erratum: Syst. Appl. Microbiol. (2006) 29:85-86.]
VALIDATION LIST No. 109 (2006), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.64380-0
Validation List No. 109. "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2006) 56:925-927.
Young JM et al. (2008)
Young, J.M., Park, D.C., Shearman, H.M., and Fargier, E. "A multilocus sequence analysis of the genus Xanthomonas." Syst. Appl. Microbiol. (2008) 31:366-377.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonas perforans meta-databases BacDive
Xanthomonas perforans LH3 organism-specific BioCyc
Xanthomonas perforans Jones et al. 2006 taxonomy/phylogenetic Encyclopedia of life
34 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Xanthomonas perforans culture/stock collections Global Catalogue of Microorganisms
36 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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