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Taxonomy browser (Xanthomonas perforans)

Xanthomonas perforans

Taxonomy ID: 442694 (for references in articles please use NCBI:txid442694)
current name
Xanthomonas perforans Jones et al. 2006
type strain of Xanthomonas perforans: personal::XV938, ATCC:BAA-983, DSM:18975, ICMP:16690, NCPPB:4321
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic genbank synonym
Xanthomonas euvesicatoria pv. perforans (Jones et al. 2006) Constantin et al. 2016
heterotypic synonym
Xanthomonas axonopodis pv. vesicatoria
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 61,323 61,314 36
Protein 601,089 596,996 -
Genome 1 1 -
Popset 100 100 -
PubMed Central 96 96 -
Gene 9,262 9,262 -
SRA Experiments 126 126 -
Protein Clusters 876 876 -
Identical Protein Groups 50,548 50,419 -
Bio Project 48 47 -
Bio Sample 254 253 2
Assembly 154 152 1
Taxonomy 2 1 -

Comments and References:

Constantin EC et al. (2016)
Constantin, E.C., Cleenwerck, I., Maes, M., Baeyen, S., Van Malderghem, C., De Vos, P., and Cottyn, B. "Genetic characterization of strains named as Xanthomonas axonopodis pv. dieffenbachiae leads to a taxonomic revision of the X. axonopodis species complex." Plant Pathol. (2016) 65:792-806. [No PubMed record available.]
Jones JB et al. (1998)
Jones, J.B., Stall, R.E., and Bouzar, H. "Diversity among xanthomonads pathogenic on pepper and tomato." Ann. Rev. Phytopathol. (1998) 36:41-58. [No PubMed record available.]
Jones JB et al. (2000)
Jones, J.B., Bouzar, H., Stall, R.E., Almira, E.C., Roberts, P.D., Bowen, B.W., Sudberry, J., Strickler, P.M., and Chun, J. "Systematic analysis of xanthomonads (Xanthomonas spp.) associated with pepper and tomato lesions." Int. J. Syst. Evol. Microbiol. (2000) 50:1211-1219.
Jones JB et al. (2004)
Jones, J.B., Lacy, G.H., Bouzar, H., Stall, R.E., and Schaad, N.W. "Reclassification of the xanthomonads associated with bacterial spot disease of tomato and pepper." Syst. Appl. Microbiol. (2004) 27:755-762. [Erratum: Syst. Appl. Microbiol. (2006) 29:85-86.]
VALIDATION LIST No. 109 (2006), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.64380-0
Validation List No. 109. "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2006) 56:925-927.
Young JM et al. (2008)
Young, J.M., Park, D.C., Shearman, H.M., and Fargier, E. "A multilocus sequence analysis of the genus Xanthomonas." Syst. Appl. Microbiol. (2008) 31:366-377.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xanthomonas perforans meta-databases BacDive
Xanthomonas perforans LH3 organism-specific BioCyc
Xanthomonas perforans Jones et al. 2006 taxonomy/phylogenetic Encyclopedia of life
34 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Xanthomonas perforans culture/stock collections Global Catalogue of Microorganisms
36 records from provider organism-specific Integrated Microbial Genomes
Notes:
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