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Taxonomy browser (Rhodococcus hoagii)

Rhodococcus hoagii

Taxonomy ID: 43767 (for references in articles please use NCBI:txid43767)
current name
Rhodococcus hoagii (Morse 1912) Kampfer et al. 2014
homotypic synonym:
"Bacillus hoagii" Morse 1912, effective name 1)
NCBI BLAST name: high GC Gram+
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic genbank synonym
Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists 1980) (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists, 1980), nom. approb. 2)
type strain of Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists 1980): ATCC:25729, ATCC:6939, CCUG:892, CIP:54.72, DSM:20307, HAMBI:2061, IFO:14956, NBRC:14956, JCM:1311, JCM:3209, BCCM/LMG:18452, NBRC:101255, NCTC:1621, NRRL:B:16538, VKM:Ac:953
homotypic synonym:
"Mycobacterium equi" (Magnusson 1923) Jensen 1934, effective name 1)
"Prescottella equi" (Magnusson 1923) Jones et al. 2013, effective name 1)
"Prescottia equi" (Magnusson 1923) Jones et al. 2013, effective name 1)
Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1979 (sic)
heterotypic synonym
"Corynebacterium (pyogenes) equi roseum" Lutje 1923, effective name 1)
heterotypic synonym
"Corynebacterium pyogenes (equi)" Miessner and Wetzel 1923
heterotypic synonym
"Corynebacterium magnusson-holth" Plum 1940, effective name 1)
heterotypic synonym
"Proactinomyces restrictus" Turfitt 1944, effective name 1)
heterotypic synonym
"Corynebacterium purulentus" (sic) Holtman 1945, effective name 1)
heterotypic synonym
"Mycobacterium restrictum" (Turfitt 1944) Krasil'nikov 1949, effective name 1)
heterotypic synonym
Nocardia restricta (Turfitt 1944) McClung 1974 (Approved Lists 1980), nom. approb. 2)
type strain of Nocardia restricta: CCUG:17758, DSM:43199, JCM:3223, BCCM/LMG:7335, ATCC:14887
heterotypic synonym
Corynebacterium hoagii
homotypic synonym:
Corynebacterium hoagii (Morse 1912) Eberson 1918 (Approved Lists 1980), nom. approb. 2)
type strain of Corynebacterium hoagii: ATCC:7005, CCUG:20991, CIP:81.17, DSM:20295, JCM:1319, NBRC:103062, NCTC:10673
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 6,000 5,757
Protein 211,424 197,006
Structure 6 1
Genome 1 1
Popset 66 66
Conserved Domains 1 1
PubMed Central 940 940
Gene 9,582 343
SRA Experiments 13 7
Protein Clusters 2,944 2,944
Identical Protein Groups 59,932 57,909
Bio Project 14 9
Bio Sample 70 64
Bio Systems 213 -
Assembly 41 36
Probe 33 33
PubChem BioAssay 59 59
Taxonomy 4 1

Notes:

Comments and References:

Rhodococcus equi = Corynebacterium equi = Nocardia restricta = Corynebacterium hoagii
Rhodococcus equi and Corynebacterium equi are homotypic synonyms and are conspecific with Corynebacterium hoagii. Rhodococcus equi is also a senior heterotypic synonym of Nocardia restricta.
Collins MD & Cummins CS (1986)
Collins, M.D., and Cummins, C.S. "Genus Corynebacterium Lehmann and Neumann 1896, 350AL." In: P.H.A. Sneath, N.S. Mair, M.E. Sharpe. and J.G. Holt (ed.) Bergey's Manual of Systematic Bacteriology, vol. 2, The Williams & Wilkins Co., Baltimore (1986) p. 1266-1276.
Euzeby JP (1997) (Rhodococcus equi)
Euzeby, J.P. "Corrigenda to the Approved Lists of Bacterial Names and to the amended edition of the Approved Lists of Bacterial Names." Int. J. Syst. Bacteriol. (1997) 47:1271-1272. [No PubMed record available.]
Fernandez-Garayzabal JF et al. (1996)
Fernandez-Garayzabal, J.F., Suarez, G., Blanco, M.M., Gibello, A., and Dominguez, L. "Taxonomic note: a proposal for reviewing the interpretation of the CAMP reaction between Listeria monocytogenes and Rhodococcus equi." Int. J. Syst. Bacteriol. (1996) 46:832-834.
Hill LR et al. (1984) (reference relating to orthographic revision)
Hill, L.R., Skerman, V.B.D., and Sneath, P.H.A. "Corrigenda to the Approved Lists of Bacterial Names edited for the International Committee on Systematic Bacteriology." Int. J. Syst. Bacteriol. (1984) 34:508-511. [No PubMed record available.]
Jones AL et al. (2013)
Jones, A.L., Sutcliffe, I.C., and Goodfellow, M. "Prescottia equi gen. nov., comb. nov.: a new home for an old pathogen." Antonie Van Leeuwenhoek (2013) 103:655-671.
Jones AL et al. (2013b)
Jones, A.L., Sutcliffe, I.C., and Goodfellow, M. "Proposal to replace the illegitimate genus name Prescottia Jones et al. 2013 with the genus name Prescottella gen. nov. and to replace the illegitimate combination Prescottia equi Jones et al. 2013 with Prescottella equi comb. nov." Antonie van Leeuwenhoek (2013) 103:1405-1407.
Kampfer P et al. (2014c)
Kampfer, P., Dott, W., Martin, K., and Glaeser, S.P. "Rhodococcus defluvii sp. nov., isolated from wastewater of a bioreactor and formal proposal to reclassify [Corynebacterium hoagii] and Rhodococcus equi as Rhodococcus hoagii comb. nov." Int. J. Syst. Evol. Microbiol. (2014) 64:755-761.
Morse ME (1912)
Morse, M.E. "A study of the diphtheria group of organisms by the biometrical method." J. Infect. Dis. (1912) 11:253-285. [No PubMed record available.]
Rainey FA et al. (1995b)
Rainey, F.A., Burghardt, J., Kroppenstedt, R., Klatte, S., and Stackebrandt, E. "Polyphasic evidence for the transfer of Rhodococcus roseus to Rhodococcus rhodochrous." Int. J. Syst. Bacteriol. (1995) 45:101-103. [No PubMed record available.]
Skerman VBD et al. (1980) (Corynebacterium equi)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Skerman VBD et al. (1980) (Corynebacterium hoagii)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Skerman VBD et al. (1980) (Nocardia restricta)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Skerman VBD et al. (1980) (Rhodococcus equi)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Sly LI et al. (1983)
Sly, L.I., Mutimer, M.D., and Woolcock, J.B. "Confusing irregularities in the nomenclature of some Rhodococcus species." Int. J. Syst. Bacteriol. (1983) 33:658-659. [No PubMed record available.]
Vázquez-Boland JA & Meijer WG (2019)
Vázquez-Boland, J.A., and Meijer, W.G. "The pathogenic actinobacterium Rhodococcus equi: what's in a name?" Mol. Microbiol. (2019) 112:1-15.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rhodococcus hoagii meta-databases BacDive
Corynebacterium equi Magnusson 1923 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Rhodococcus equi culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Proactinomyces restrictus Turfitt 1944 taxonomy/phylogenetic Index Fungorum
5 records from this provider organism-specific Integrated Microbial Genomes
2 records from this provider taxonomy/phylogenetic Integrated Taxonomic Information System
Wikipedia taxonomy/phylogenetic iPhylo
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