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Taxonomy browser (Burkholderia plantarii)

Burkholderia plantarii

Taxonomy ID: 41899 (for references in articles please use NCBI:txid41899)
current name
Burkholderia plantarii (Azegami et al. 1987) Urakami et al. 1994
type strain of Burkholderia plantarii: ATCC:43733, CFBP:3573, CFBP:3997, CIP:105769, DSM:9509, ICMP:9424, JCM:5492, BCCM/LMG:9035, NCPPB:3590, NIAES:1723, personal::AZ 8201
homotypic synonym:
Pseudomonas plantarii Azegami et al. 1987
includes:
Burkholderia glumae PG1
equivalent:
Burkholderia glumae str. PG1
Burkholderia glumae strain PG1
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Burkholderia vandii Urakami et al. 1994
type strain of Burkholderia vandii: ATCC:51545, BCCM/LMG:16020
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 865 860 166
Protein 51,296 51,291 -
Genome 1 1 -
Popset 9 9 -
PubMed Central 153 153 -
SRA Experiments 57 57 -
Identical Protein Groups 28,960 28,960 -
BioProject 14 13 -
BioSample 32 32 3
Assembly 8 8 2
Taxonomy 2 1 -

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Coenye T et al. (1999)
Coenye, T., Holmes, B., Kersters, K., Govan, J.R., and Vandamme, P. "Burkholderia cocovenenans (van Damme et al. 1960) Gillis et al. 1995 and Burkholderia vandii Urakami et al. 1994 are junior synonyms of Burkholderia gladioli (Severini 1913) Yabuuchi etal. 1993 and Burkholderia plantarii (Azegami et al. 1987) Urakami et al. 1994, respectively." Int. J. Syst. Bacteriol. (1999) 49:37-42.
Maeda Y et al. (2006)
Maeda, Y., Shinohara, S., Kiba, A., Ohnishi, K., Furuya, N., Kawamura, Y., Ezaki, T., Vandamme, P.A.R., Tsushima, S., and Hikichi, Y. "Phylogenetic study and multiplex PCR-based detection of Burkholderia plantarii, Burkholderia glumae and Burkholderia gladioli using gyrB and rpoD sequences." Int. J. Syst. Evol. Microbiol. (2006) 56:1031-1038. Published online 31 December 2005. doi:10.1099/ijs.0.64184-0
Urakami T et al. (1994)
Urakami, T., Ito-Yoshida, C., Araki, H., Kijima, T., Suzuki, K.I., and Komagata, K. "Transfer of Pseudomonas plantarii and Pseudomonas glumae to Burkholderia as Burkholderia spp. and description of Burkholderia vandii sp. nov." Int. J. Syst. Bacteriol. (1994) 44:235-245. [No PubMed record available.]
Young JM et al. (1996) (reference with type strain information)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]
Azegami K et al. (1987)
Azegami, K., Nishiyama, K., Watanabe, Y., Kadota, I., Ohuchi, A., and Fukazawa, C. "Pseudomonas plantarii sp. nov., the causal agent of rice seedling blight." Int. J. Syst. Bacteriol. (1987) 37:144-152. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Burkholderia plantarii meta-databases BacDive
2 records from this provider organism-specific BioCyc
Burkholderia plantarii (Azegami et al. 1987) Urakami et al. 1994 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0139549 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Burkholderia plantarii culture/stock collections Global Catalogue of Microorganisms
2 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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