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Taxonomy browser (Capsicum annuum)

Capsicum annuum

Taxonomy ID: 4072 (for references in articles please use NCBI:txid4072)
current name
Capsicum annuum L., 1753 in [Linnaeus C (1753c)]
includes:
Capsicum sp. HD-HW
Capsicum sp. JYM-2013
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
   Entrez records   
Database name Subtree links Direct links
Nucleotide 611,431 594,090
Protein 165,372 164,696
Structure 11 11
Genome 1 1
Popset 107 105
GEO Datasets 1,348 1,344
PubMed Central 6,832 6,832
Gene 56,770 56,770
SRA Experiments 12,513 12,361
GEO Profiles 32,448 32,448
Identical Protein Groups 108,268 108,153
BioProject 257 243
BioSample 13,404 13,265
Assembly 26 22
PubChem BioAssay 13 13
Taxonomy 5 1

Comments and References:

Linnaeus C (1753c)
Linnaeus C. 1753. [No title available]. Species Plantarum; 1
image:Capsicum annuum
GRIN (Nov 14, 2012)
Name accessed on 14 November 2012 in: USDA, ARS, National Genetic Resources Program Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Genome Information

Go to NCBI genomic BLAST page for Capsicum annuum
Genome view: 13 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Capsicum annuum taxonomy taxonomy/phylogenetic Arctos Specimen Database
Capsicum annuum L. taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Capsicum annuum L. taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Capsicum annuum taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Capsicum annuum (L.) herbarium/museum collections PlantaeDB, University of Bucharest
2 records from this provider taxonomy/phylogenetic Plants of the World Online
Capsicum annuum taxonomy/phylogenetic The International Plant Names Index
Capsicum annuum L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
6 records from provider organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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