Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy Books
   
Taxonomy browser (Capsicum annuum)

Capsicum annuum

Taxonomy ID: 4072 (for references in articles please use NCBI:txid4072)
Scientific name: Capsicum annuum L.
includes: Capsicum sp. HD-HW
includes: Capsicum sp. JYM-2013
Inherited blast name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
   Entrez records   
Database name Subtree links Direct links
Nucleotide 386,656 369,551
Nucleotide EST 118,959 118,953
Nucleotide GSS 15 15
Protein 84,199 83,881
Structure 4 4
Genome 1 1
Popset 69 69
GEO Datasets 171 167
UniGene 132,049 132,049
PubMed Central 2,340 2,340
Gene 41,730 41,730
SRA Experiments 627 608
GEO Profiles 32,448 32,448
Identical Protein Groups 66,894 66,846
Bio Project 69 67
Bio Sample 802 790
Assembly 6 5
Probe 23,934 23,934
PubChem BioAssay 13 13
Taxonomy 5 1

Comments and References:

Nota BeneGRIN (Nov 14, 2012)
Name accessed on 14 November 2012 in: USDA, ARS, National Genetic Resources Program Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.


Genome Information

Go to NCBI genomic BLAST page for Capsicum annuum
Genome view: 13 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Capsicum annuum taxonomy taxonomy/phylogenetic Arctos Specimen Database
Capsicum annuum L. taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Capsicum annuum L. taxonomy/phylogenetic Integrated Taxonomic Information System
Capsicum annuum taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Capsicum annuum taxonomy/phylogenetic The International Plant Names Index
Capsicum annuum L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
6 records from this provider organism-specific diArk - a resource for eukaryotic genome research
2 records from provider taxonomy/phylogenetic electronic Plant Information Centre
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers



Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]