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Taxonomy browser (Capsicum annuum)

Capsicum annuum

Taxonomy ID: 4072 (for references in articles please use NCBI:txid4072)
Scientific name: Capsicum annuum L.
includes: Capsicum sp. HD-HW
includes: Capsicum sp. JYM-2013
NCBI BLAST® name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
   Entrez records   
Database name Subtree links Direct links
Nucleotide 505,679 488,557
Protein 84,232 83,903
Structure 4 4
Genome 1 1
Popset 70 69
GEO Datasets 172 168
UniGene 132,049 132,049
PubMed Central 2,618 2,618
Gene 41,730 41,730
SRA Experiments 697 678
GEO Profiles 32,448 32,448
Identical Protein Groups 66,917 66,859
Bio Project 78 76
Bio Sample 878 866
Assembly 6 5
Probe 23,934 23,934
PubChem BioAssay 13 13
Taxonomy 5 1

Comments and References:

Nota BeneGRIN (Nov 14, 2012)
Name accessed on 14 November 2012 in: USDA, ARS, National Genetic Resources Program Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Genome Information

Go to NCBI genomic BLAST® page for Capsicum annuum
Genome view: 13 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Capsicum annuum taxonomy taxonomy/phylogenetic Arctos Specimen Database
Capsicum annuum L. taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Capsicum annuum L. taxonomy/phylogenetic Integrated Taxonomic Information System
Capsicum annuum taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Capsicum annuum taxonomy/phylogenetic The International Plant Names Index
Capsicum annuum L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
6 records from this provider organism-specific diArk - a resource for eukaryotic genome research
2 records from provider taxonomy/phylogenetic electronic Plant Information Centre
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

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