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Taxonomy browser (Thermoanaerobacter sp. X514)

Thermoanaerobacter sp. X514

Taxonomy ID: 399726 (for references in articles please use NCBI:txid399726)
Scientific name: Thermoanaerobacter sp. X514
Inherited blast name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter
   Entrez records   
Database name Direct links
Nucleotide 62
Protein 4,941
Structure 1
Genome 1
GEO Datasets 91
Gene 2,476
SRA Experiments 165
Protein Clusters 1
Bio Project 6
Bio Sample 6
Bio Systems 166
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentHemme CL et al. (2010)
Hemme, C.L., Mouttaki, H., Lee, Y.-J., Goodwin, L., Lucas, S., Copeland, A., Lapidus, A., Glavina del Rio, T., Tice, H., Saunders, E., Brettin, T., Detter, J.C., Han, C.S., Pitluck, S., Land, M.L., Hauser, L.J., Krypides, N., Mikhailova, N., He, Z., Wu, L., Van Nostrand, J.D., Henrissat, B., He, Q., Lawson, P.A., Tanner, R.S., Lynd, L.R., Wiegel, J., Fields, M.W., Arkin, A.P., Schadt, C.W., Stevenson, B.S., McInerney, M.J., Yang, Y., Dong, H., Huhnke, R.L., Mielenz, J.R., Ding, S.-Y., Himmel, M.E., Taghavi, S., van der Lelie, D., Rubin, E.M., and Zhou, J. "Sequencing of multiple Clostridia genomes related to biomass conversion and biofuels production." J. Bacteriol. (2010) 192:6494-6496.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
454 WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
666,675 33,583 700,258
Totals per type
666,675 33,583 700,258

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Thermoanaerobacter sp. X514 X514 organism-specific BioCyc
GOLD: Go0003524 organism-specific Genomes On Line Database
641522656: Thermoanaerobacter sp. X514 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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