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Taxonomy browser (Rivularia sp. PCC 7116)

Rivularia sp. PCC 7116

Taxonomy ID: 373994 (for references in articles please use NCBI:txid373994)
current name
Rivularia sp. PCC 7116
equivalent:
Calothrix sp. ATCC 29111 1)
Calothrix sp. PCC 7116
Nunduva sp. PCC 7116 in [Johansen JR et al. (2021)]
Rivularia sp. LIP 2)
NCBI BLAST name: cyanobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Cyanobacteria/Melainabacteria group; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia; unclassified Rivularia (in: Bacteria)
   Entrez records   
Database name Direct links
Nucleotide 18
Protein 13,202
Genome 1
Gene 6,947
SRA Experiments 1
Protein Clusters 4,358
Identical Protein Groups 7,372
BioProject 2
BioSample 1
Assembly 1
Taxonomy 1

Notes:

Comments and References:

Johansen JR et al. (2021), PubMed: abstract
Johansen, J.R., González-Resendiz, L., Escobar-Sánchez, V., Segal-Kischinevzky, C., Martínez-Yerena, J., Hernández-Sánchez, J., Hernández-Pérez, G., and León-Tejera, H. "When will taxonomic saturation be achieved? A case study in Nunduva and Kyrtuthrix (Rivulariaceae, Cyanobacteria)." J. Phycol. (2021) 57(6):1699-1720.
genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Shih PM et al. (2013)
Shih, P.M., Wu, D., Latifi, A., Axen, S.D., Fewer, D.P., Talla, E., Calteau, A., Cai, F., Tandeau de Marsac, N., Rippka, R., Herdman, M., Sivonen, K., Coursin, T., Laurent, T., Goodwin, L., Nolan, M., Davenport, K.W., Han, C.S., Rubin, E.M., Eisen, J.A., Woyke, T., Gugger, M., and Kerfeld, C.A. "Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing." Proc. Natl. Acad. Sci. USA (2013) 110:1053-1058.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rivularia sp. PCC 7116 PCC 7116 organism-specific BioCyc
GOLD: Go0001840 organism-specific Genomes On Line Database
2510065008: Rivularia sp. PCC 7116 organism-specific Integrated Microbial Genomes
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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