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Taxonomy browser (Brassica oleracea)

Brassica oleracea

Taxonomy ID: 3712 (for references in articles please use NCBI:txid3712)
Scientific name: Brassica oleracea L., 1753
Genbank common name: wild cabbage
Inherited blast name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
   Entrez records   
Database name Subtree links Direct links
Nucleotide 162,539 2,222
Nucleotide EST 179,238 26,700
Nucleotide GSS 681,027 680,969
Protein 59,731 1,842
Structure 1 -
Genome 1 1
Popset 81 80
GEO Datasets 235 153
UniGene 14,286 14,286
PubMed Central 3,592 2,968
Gene 53,142 53,142
SRA Experiments 929 627
GEO Profiles 22,810 22,810
Identical Protein Groups 52,182 1,134
Bio Project 91 43
Bio Sample 871 611
Assembly 4 2
Clone DB 43,694 43,694
Probe 1,130 923
PubChem BioAssay 124 61
Taxonomy 14 1

Comments and References:

Nota BeneGRIN (Apr 15, 2013)
Name accessed on 15 April 2013 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Nota BeneFNA - Brassica
Warwick SI. 2009. Brassica Linnaeus, Sp. Pl. 2: 666. 1753; Gen. Pl. ed. 5, 299. 1754. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Vol. 7: Magnoliophyta: Salicaceae to Brassicaceae. New York and Oxford. On-line version.

Nota BeneFlora of China - Brassicaceae
Tai-yien Cheo, Lianli Lu, Guang Yang, Ihsan Al-Shehbaz & Vladimir Dorofeev. 2001. Brassicaceae Burnett. In Wu, Z. Y. & P. H. Raven, eds. Flora of China. Vol. 8 (Brassicaceae through Saxifragaceae). Science Press, Beijing, and Missouri Botanical Garden Press, St. Louis. Online at Flora of China: www.efloras.org


Genome Information

Go to NCBI genomic BLAST page for Brassica oleracea
Genome view: 9 chromosomes
Names C1 C2 C3 C4 C5 C6 C7 C8 C9
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
TIGR - The Institute for Genome Research
415,522 415,522
WUGSC - Washington University, Genome Sequencing Center
173,145 173,145
Totals per type
588,667 588,667

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Brassica oleracea L. taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0002793 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Brassica oleracea L. taxonomy/phylogenetic Integrated Taxonomic Information System
Brassica oleracea taxonomy/phylogenetic Lifemap
Brassica oleracea taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Brassica oleracea taxonomy/phylogenetic The International Plant Names Index
Brassica oleracea taxonomy/phylogenetic TreeBase
Brassica oleracea L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Brassica oleracea organism-specific WebScipio - eukaryotic gene identification
diArk: Brassica oleracea organism-specific diArk - a resource for eukaryotic genome research
Brassica oleracea taxonomy/phylogenetic electronic Plant Information Centre
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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