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Taxonomy browser (Brassica napus)

Brassica napus

Taxonomy ID: 3708 (for references in articles please use NCBI:txid3708)
Scientific name: Brassica napus L., 1753
Genbank common name: rape
Inherited blast name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name: oilseed rape
common name: rapeseeds
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
   Entrez records   
Database name Subtree links Direct links
Nucleotide 186,671 185,856
Nucleotide EST 643,944 643,881
Nucleotide GSS 102,619 102,562
Protein 198,106 197,028
Structure 9 9
Genome 1 1
Popset 86 86
GEO Datasets 777 777
UniGene 26,117 26,117
PubMed Central 5,697 5,692
Gene 128,793 128,793
SRA Experiments 4,695 4,608
Identical Protein Groups 151,241 151,187
Bio Project 211 204
Bio Sample 6,485 6,407
Bio Systems 271 271
Assembly 3 3
Clone DB 58,896 58,896
Probe 6,883 6,880
PubChem BioAssay 98 98
Taxonomy 3 1

Comments and References:

Nota BeneGRIN (Apr 15, 2013)
Name accessed on 15 April 2013 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Nota BeneFlora of China - Brassicaceae
Tai-yien Cheo, Lianli Lu, Guang Yang, Ihsan Al-Shehbaz & Vladimir Dorofeev. 2001. Brassicaceae Burnett. In Wu, Z. Y. & P. H. Raven, eds. Flora of China. Vol. 8 (Brassicaceae through Saxifragaceae). Science Press, Beijing, and Missouri Botanical Garden Press, St. Louis. Online at Flora of China: www.efloras.org

Nota BeneFNA - Brassica
Warwick SI. 2009. Brassica Linnaeus, Sp. Pl. 2: 666. 1753; Gen. Pl. ed. 5, 299. 1754. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Vol. 7: Magnoliophyta: Salicaceae to Brassicaceae. New York and Oxford. On-line version.

Nota BeneLinnaean Plant Names
The Linnaean Plant Name Typification Project. 2004. The Natural History Museum, Cromwell Rd., London, SW7 5BD, UK.


Genome Information

Go to NCBI genomic BLAST page for Brassica napus
Genome view: 20 chromosomes
Names A1 A2 A3 A4 A5 A6 A7 A8 A9 A10 C1 C2 C3 C4 C5 C6 C7 C8 C9 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Brassica napus taxonomy taxonomy/phylogenetic Arctos Specimen Database
Brassica napus L. taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Brassica napus L. taxonomy/phylogenetic Integrated Taxonomic Information System
Brassica napus taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Brassica napus taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Brassica napus taxonomy/phylogenetic The International Plant Names Index
Brassica napus L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Brassica napus organism-specific WebScipio - eukaryotic gene identification
diArk: Brassica napus organism-specific diArk - a resource for eukaryotic genome research
Brassica napus taxonomy/phylogenetic electronic Plant Information Centre
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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