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Taxonomy browser (Mycobacteroides abscessus)

Mycobacteroides abscessus

Taxonomy ID: 36809 (for references in articles please use NCBI:txid36809)
current name
Mycobacteroides abscessus (Moore and Frerichs 1953) Gupta et al. 2018
type strain of Mycobacteroides abscessus: ATCC:19977, CCUG:20993, CIP:104536, DSM:44196, JCM:13569, NCTC:13031, TMC:1543, personal::Hauduroy L948
homotypic synonym:
"Mycobacterium chelonei" (sic) Bergey et al. 1923, effective name 1)
"Mycobacterium abcessus" Moore and Frerichs 1953, effective name 1)
Mycobacterium chelonae subsp. abscessus corrig. (Moore and Frerichs 1953) Kubica et al 1972 (Approved Lists 1980), nom. approb. 2)
Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992 emend. Leao et al. 2011
Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992 emend. Tortoli et al. 2016
Mycobacterium chelonei subsp. abscessus
NCBI BLAST name: high GC Gram+
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacteroides
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 197,228 43,245 1,021
Protein 8,075,444 1,834,223 -
Structure 127 68 -
Genome 2 1 -
Popset 161 128 -
GEO Datasets 61 52 -
PubMed Central 1,933 1,896 -
Gene 25,369 10,021 -
SRA Experiments 5,132 2,356 -
Protein Clusters 5,800 5,800 -
Identical Protein Groups 457,601 274,398 -
Bio Project 166 56 -
Bio Sample 5,204 2,686 17
Bio Systems 2,108 423 -
Assembly 1,749 335 11
Probe 2 2 -
PubChem BioAssay 284 238 -
Taxonomy 88 1 -


Comments and References:

Gupta RS et al. (2018)
Gupta, R.S., Lo, B., and Son, J. "Phylogenomics and comparative genomic studies robustly support division of the genus Mycobacterium into an emended genus Mycobacterium and four novel genera." Front. Microbiol. (2018) 9:67. [Corrigendum: Front. Microbiol. (2019) 10:714. (PMID 31024493)]
Hill LR et al. (1984) (reference relating to orthographic revision)
Hill, L.R., Skerman, V.B.D., and Sneath, P.H.A. "Corrigenda to the Approved Lists of Bacterial Names edited for the International Committee on Systematic Bacteriology." Int. J. Syst. Bacteriol. (1984) 34:508-511. [No PubMed record available.]
Kusunoki S & Ezaki T (1992)
Kusunoki, S., and Ezaki, T. "Proposal of Mycobacterium peregrinum sp. nov., nom. rev., and elevation of Mycobacterium chelonae subsp. abscessus (Kubica et al.) to species status: Mycobacterium abscessus comb. nov." Int. J. Syst. Bacteriol. (1992) 42:240-245.
Leao SC et al. (2009)
Leao, S.C., Tortoli, E., Viana-Niero, C., Ueki, S.Y., Lima, K.V., Lopes, M.L., Yubero, J., Menendez, M.C., and Garcia, M.J. "Characterization of mycobacteria from a major Brazilian outbreak suggests a revision of the taxonomic status of members of the Mycobacterium chelonae-abscessus group." J. Clin. Microbiol. (2009) 47:2691-2698.
Leao SC et al. (2011)
Leao, S.C., Tortoli, E., Euzeby, J.P., and Garcia, M.J. "Proposal that Mycobacterium massiliense and Mycobacterium bolletii be united and reclassified as Mycobacterium abscessus subsp. bolletii comb. nov., designation of Mycobacterium abscessus subsp. abscessus subsp. nov. and emended description of Mycobacterium abscessus." Int. J. Syst. Evol. Microbiol. (2011) 61:2311-2313.
Moore M & Frerichs JB (1953)
Moore, M., and Frerichs, J.B. "An unusual acid-fast infection of the knee, with subcutaneous, abscess-like lesions of the gluteal region." J. Invest. Dermatol. (1953) 20:133-169. [No abstract available.]
Skerman VBD et al. (1980) (Mycobacterium chelonei subsp. abscessus)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
Tortoli E et al. (2016b)
Tortoli, E., Kohl, T.A., Brown-Elliott, B.A., Trovato, A., Leao, S.C., Garcia, M.J., Vasireddy, S., Turenne, C.Y., Griffith, D.E., Philley, J.V., Baldan, R., Campana, S., Cariani, L., Colombo, C., Taccetti, G., Teri, A., Niemann, S., Wallace, R.J. Jr., and Cirillo, D.M. "Emended description of Mycobacterium abscessus, Mycobacterium abscessus subs. abscessus, Mycobacterium abscessus subsp. bolletii and designation of Mycobacterium abscessus subsp. massiliense comb. nov." Int. J. Syst. Evol. Microbiol. (2016) 66:4471-4479.
VALIDATION LIST No. 181 (2018)
Validation List No. 181: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2018) 68:1411-1417.
Vuorio R et al. (1999) (reference with type strain information)
Vuorio, R., Andersson, M.A., Rainey, F.A., Kroppenstedt, R.M., Kampfer, P., Busse, H.-J., Viljanen, M., and Salkinoja-Salonen, M. "A new rapidly growing mycobacterial species, Mycobacterium murale sp. nov., isolated from the indoor walls of a children's day care centre." Int. J. Syst. Bacteriol. (1999) 49:25-35.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium abscessus meta-databases BacDive
8 records from this provider organism-specific BioCyc
Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992 taxonomy/phylogenetic Encyclopedia of life
15 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Mycobacterium abscessus culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
204 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium abscessus taxonomy/phylogenetic Lifemap
Wikipedia taxonomy/phylogenetic iPhylo
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