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Taxonomy browser (Amycolatopsis orientalis)

Amycolatopsis orientalis

Taxonomy ID: 31958 (for references in articles please use NCBI:txid31958)
current name
Amycolatopsis orientalis (Pittenger and Brigham 1956) Lechevalier et al. 1986
type strain of Amycolatopsis orientalis: ATCC:19795, CIP:107113, DSM:40040, IFO:12806, ISP:5040, JCM:4235, JCM:4600, NBRC:12806, NRRL:2450, UNIQEM:181, VKM:Ac:866, KCTC:9412, IMSNU:20058
homotypic synonym:
"Streptomyces orientalis" Pittenger and Brigham 1956, effective name 1)
Amycolatopsis orientalis (Pittenger and Brigham 1956) Lechevalier et al. 1986 emend. Nouioui et al. 2018, emended name 2) in [Nouioui I et al. (2018c)]
Nocardia orientalis (Pittenger and Brigham 1956) Pridham and Lyons 1969 (Approved Lists 1980), nom. approb. 3)
includes:
Actinoplanes sp. ATCC 53771
Amycolatopsis orientalis subsp. orientalis (Pittenger and Brigham 1956) Lechevalier et al. 1986
equivalent:
Amycolatopsis orientalis orientalis
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,116 141 215
Protein 41,338 38,262 -
Structure 81 78 -
Genome 1 1 -
Popset 12 12 -
PubMed Central 416 416 -
Gene 24,602 1 -
SRA Experiments 9 6 -
Protein Clusters 5,051 5,051 -
Identical Protein Groups 34,204 31,141 -
BioProject 6 3 -
BioSample 10 7 2
Assembly 5 2 1
PubChem BioAssay 3 3 -
Taxonomy 6 1 -

Notes:

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Howey RT et al. (1990)
Howey, R.T., Lock, C.M., and Moore, L.V.H. "Subspecies names automatically created by Rule 46." Int. J. Syst. Bacteriol. (1990) 40:317-319. [No PubMed record available.]
Lechevalier MP et al. (1986)
Lechevalier, M.P., Prauser, H., Labeda, D.P., and Ruan, J.S. "Two new genera of nocardioform actinomycetes: Amycolata gen. nov. and Amycolatopsis gen. nov." Int. J. Syst. Bacteriol. (1986) 36:29-37. [No PubMed record available.]
Pittenger RC & Brigham RB (1956)
Pittenger, R.C., and Brigham, R.B. "Streptomyces orientalis, n. sp., the source of vancomycin." Antibiot. Chemother. (1956) 6:642-647. [No PubMed record available.]
Skerman VBD et al. (1980) (Nocardia orientalis)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
Stackebrandt E et al. (2004a)
Stackebrandt, E., Kroppenstedt, R.M., Wink, J., and Schumann, P. "Reclassification of Amycolatopsis orientalis subsp. lurida Lechevalier et al. 1986 as Amycolatopsis lurida sp. nov." Int. J. Syst. Evol. Microbiol. (2004) 54:267-268.
Nouioui I et al. (2018c)
Nouioui, I., Carro, L., GarcIa-Lopez, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Goker, M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Amycolatopsis orientalis meta-databases BacDive
Amycolatopsis orientalis B-37 organism-specific BioCyc
GOLD: Go0117210 organism-specific Genomes On Line Database
Amycolatopsis orientalis culture/stock collections Global Catalogue of Microorganisms
3 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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