Taxonomy browser Taxonomy Browser (Allorhizobium ampelinum S4)

Entrez records
Database name	Direct links	Subtree links	Links from type
BioProject	2	2	-
BioSample	2	2	-
Gene	11,502	11,502	-
Identical Protein Groups	6,723	6,723	-
Nucleotide	22	22	18
Protein	11,248	11,248	-
SRA	1	1	-
Structure	16	16	-
Taxonomy	1	1	-

Allorhizobium ampelinum S4

Taxonomy ID: 311402 (for references in articles please use ncbitaxon:311402)

current name

Allorhizobium ampelinum S4

equivalent:

Agrobacterium vitis S4

NCBI BLAST name: a-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage(full): cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Allorhizobium; Allorhizobium ampelinum

Comments and References:

genome sequence

Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Slater SC et al. (2009)

Slater, S.C., Goldman, B.S., Goodner, B., Setubal, J.C., Farrand, S.K., Nester, E.W., Burr, T.J., Banta, L., Dickerman, A.W., Paulsen, I., Otten, L., Suen, G., Welch, R., Almeida, N.F., Arnold, F., Burton, O.T., Du, Z., Ewing, A., Godsy, E., Heisel, S., Houmiel, K.L., Jhaveri, J., Lu, J., Miller, N.M., Norton, S., Chen, Q., Phoolcharoen, W., Ohlin, V., Ondrusek, D., Pride, N., Stricklin, S.L., Sun, J., Wheeler, C., Wilson, L., Zhu, H., and Wood, D.W. "Genome sequences of three Agrobacterium biovars help elucidate the evolution of multi-chromosome genomes in bacteria." J. Bacteriol. (2009) 191:2501-2511.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Allorhizobium ampelinum type strain (BD-ID 175437)	meta-databases	BacDive
Agrobacterium vitis S4	organism-specific	BioCyc
Agrobacterium vitis S4	organism-specific	BioCyc
Agrobacterium vitis S4	organism-specific	BioCyc
GOLD: Go0006682	organism-specific	Genomes On Line Database
643348505: Allorhizobium ampelinum S4	organism-specific	Integrated Microbial Genomes
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix
Allorhizobium ampelinum type strain (SI-ID 397917)	meta-databases	StrainInfo, Leibniz Institute DSMZ

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.