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Taxonomy browser (Thermococcus kodakarensis)

Thermococcus kodakarensis

Taxonomy ID: 311400 (for references in articles please use NCBI:txid311400)
current name
Thermococcus kodakarensis corrig. Atomi et al. 2005
type strain of Thermococcus kodakarensis: ATCC:BAA-918, JCM:12380, personal::KOD1
NCBI BLAST name: euryarchaeotes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Thermococcus kodakaraensis" Atomi et al. 2004, effective name 1)
homotypic synonym:
Pyrococcus kodakaraensis
heterotypic synonym
Pyrococcus kodadaraensis (sic)
Lineage( full )
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 364 223 45
Protein 12,705 7,175 -
Structure 219 59 -
Conserved Domains 2 - -
GEO Datasets 156 143 -
PubMed Central 1,456 1,456 -
Gene 7,299 4,735 -
SRA Experiments 499 440 -
Protein Clusters 1,697 1,697 -
Identical Protein Groups 3,830 2,427 -
BioProject 32 25 -
BioSample 495 438 11
Datasets Genome 3 2 -
Taxonomy 2 1 -

Notes:

Comments and References:

Atomi H et al. (2004)
Atomi,H., Fukui, T., Kanai, T., Morikawa, M., and Imanaka, T. "Description of Thermococcus kodakaraensis sp. nov., a well studied hyperthermophilic archaeon previously reported as Pyrococcus sp. KOD1" Archaea (2004) 1:263-267. Published online 16 April 2004
Fujiwara S et al. (1998)
Fujiwara, S., Takagi, M., and Imanaka, T. " Archaeon Pyrococcus kodakaraensis KOD1: application and evolution." Biotechnol. Annu. Rev. (1998) 4:259-284.
Morikawa M et al. (1994)
Morikawa, M., Izawa, Y., Rashid, N., Hoaki, T., and Imanaka, T. "Purification and characterization of a thermostable thiol protease from a newly isolated hyperthermophilic Pyrococcus sp." Appl. Environ. Microbiol. (1994) 60:4559-4566.
Tang XF et al. (2000)
Tang, X.F., Ezaki, S., Atomi, H., and Imanaka, T. "Biochemical analysis of a thermostable tryptophan synthase from a hyperthermophilic archaeon." Eur. J. Biochem. (2000) 267:6369-6377.
VALIDATION LIST No. 103 (2005), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.63767-0
Validation list No. 103: "Validation of publication of new names and new combinations previously effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2005) 55:983-985.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Thermococcus kodakarensis corrig. Atomi et al. 2005 taxonomy/phylogenetic Encyclopedia of life
Thermococcus kodakarensis culture/stock collections Global Catalogue of Microorganisms
Thermococcus kodakarensis | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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