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Taxonomy browser (Chlamydomonas reinhardtii)

Chlamydomonas reinhardtii

Taxonomy ID: 3055 (for references in articles please use NCBI:txid3055)
current name
Chlamydomonas reinhardtii P.A.Dangeard, 1888, nom. cons. 1)
epitype of Chlamydomonas reinhardtii: UTEX:90
includes:
Chlamydomonas reinhardtii strain CC-1373
NCBI BLAST name: green algae
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Chlamydomonas smithii R.W.Hoshaw & H.Ettl, 1966
reference material of Chlamydomonas smithii: SAG:53.72, SAG:54.72
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 267,782 267,782 3
Protein 46,972 46,972 -
Structure 309 309 -
Genome 1 1 -
Popset 81 81 -
Conserved Domains 2 2 -
GEO Datasets 1,602 1,602 -
PubMed Central 13,752 13,752 -
Gene 20,013 20,013 -
SRA Experiments 5,061 5,061 -
Protein Clusters 6,978 6,978 -
Identical Protein Groups 20,164 20,164 -
BioProject 1,563 1,563 -
BioSample 4,951 4,951 1
Assembly 11 11 -
PubChem BioAssay 11 11 -
Taxonomy 2 1 -

Notes:

Comments and References:

image:Chlamydomonas reinhardtii
Proeschold T et al. 2005
Proeschold T, Harris EH, Coleman AW. 2005. Portrait of a species: Chlamydomonas reinhardtii. Genetics. 170(4): 1601-1610.
Nozaki H et al. 2002
Nozaki H, Onishi K, Morita E. 2002. Differences in pyrenoid morphology are correlated with differences in the rbcL genes of members of the Chloromonas lineage (Volvocales, Chlorophyceae). Journal of Molecular Evolution. 55(4): 414-30.
Proeschold T et al. 2001
Proeschold T, Marin B, Schloesser UG and Melkonia M. 2001. Molecular phylogeny and taxonomic revision of Chlamydomonas (Chlorophyta). I. Emendation of Chlamydomonas Ehrenberg and Chloromonas Gobi, and description of Oogamochlamys gen. nov. and Lobochlamys gen. nov. Protist 152: 265-300.
Hoshaw RW & Ettl H 1966
Hoshaw RW and Ettl H. 1966. Chlamydomonas smithii sp. nov. - a chlamydomonad interfertile with Chlamydomonas reinhardtii. Journal of Phycology 2: 93-96.

Genome Information

Go to NCBI genomic BLAST page for Chlamydomonas reinhardtii
Genome view: 17 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Chlamydomonas reinhardtii taxonomy/phylogenetic AlgaeBase
3 records from this provider supplemental materials Dryad Digital Repository
GOLD: 528 Organisms organism-specific Genomes On Line Database
Chlamydomonas reinhardtii culture/stock collections Global Catalogue of Microorganisms
2 records from this provider organism-specific Integrated Microbial Genomes
Chlamydomonas reinhardtii Dangeard, 1899 taxonomy/phylogenetic Integrated Taxonomic Information System
EST Index clones/clone libraries Kazusa DNA Research Institute
Chlamydomonas reinhardtii taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
Chlamydomonas reinhardtii taxonomy/phylogenetic TreeBase
WebScipio: Chlamydomonas reinhardtii organism-specific WebScipio - eukaryotic gene identification
2 records from this provider taxonomy/phylogenetic World Register of Marine Species
diArk: Chlamydomonas reinhardtii organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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