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Taxonomy browser (Pseudomonas aeruginosa)

Pseudomonas aeruginosa

Taxonomy ID: 287 (for references in articles please use NCBI:txid287)
current name
Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980), nom. approb. 1)
basionym:
"Bacterium aeruginosum" Schroeter 1872, effective name 2)
type strain of "Bacterium aeruginosum": ATCC:10145, ATCC:10145-U, CCEB:481, CCUG:28447, CCUG:29297, CCUG:551, CFBP:2466, CIP:100720, DSM:50071, IBCS:277, IFO:12689, JCM:5962, BCCM/LMG:1242, NBRC:12689, NCCB:76039, NCIMB:8295, NCTC:10332, NRRL:B-771, RH:815, VKM:B-588, ICPB:2523, CCUG:551
homotypic synonym:
"Bacterium aeruginosum" Cohn 1872, effective name 3)
"Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885, effective name 4)
Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980) emend. Rudra et al. 2022, emended name 5) in [Rudra B et al. (2022)]
probable synonym or variety: "Pseudomonas polycolor" Clara 1930
includes:
Pseudomonas sp. 2_1_26
Pseudomonas sp. ACP_02
Pseudomonas sp. CRRI 93
Pseudomonas sp. PR_01
Pseudomonas sp. PSE5
Pseudomonas sp. RV3
bacterium ASFP-37
bacterium ASFP-38
bacterium ASFP-45
bacterium ASFP-46
bacterium ASFP-48
Pseudomonas sp. HSA1/2016
Pseudomonas sp. UFT2/2016
Pseudomonas sp. NCIM 2036
Pseudomonas sp. NCIM 2862
bacterium CRM125
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Micrococcus pyocyaneus" Zopf 1884, effective name 6)
heterotypic synonym
"Pseudomonas pyocyanea" (Zopf 1884) Migula 1895, effective name 7)
heterotypic synonym
Pseudomonas polycolor
heterotypic synonym
"Bacillus pyocyaneus" (Zopf 1884) Flugge 1886, effective name 8)
heterotypic synonym
"Bacterium pyocyaneum" (Zopf 1884) Lehmann and Neumann 1896, effective name 9)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 3,133,554 2,990,008 7,485
Protein 24,298,918 22,819,557 -
Structure 2,873 1,382 -
Genome 1 1 -
Popset 1,072 1,071 -
Conserved Domains 9 7 -
GEO Datasets 7,345 4,476 -
PubMed Central 120,167 120,167 -
Gene 128,094 3,304 -
SRA Experiments 61,283 51,600 -
GEO Profiles 141,600 141,600 -
Protein Clusters 7,547 7,547 -
Identical Protein Groups 4,007,600 3,975,738 -
BioProject 3,210 2,458 -
BioSample 74,593 65,256 15
Assembly 33,180 32,719 -
PubChem BioAssay 13,748 13,258 -
Taxonomy 383 1 -

Notes:

Comments and References:

Rudra B et al. (2022), PubMed: abstract
Rudra, B., Duncan, L., Shah, A.J., Shah, H.N., and Gupta, R.S. "Phylogenomic and comparative genomic studies robustly demarcate two distinct clades of Pseudomonas aeruginosa strains: proposal to transfer the strains from an outlier clade to a novel species Pseudomonas paraeruginosa sp. nov." Int. J. Syst. Evol. Microbiol. (2022) 72(11):005542.
image:Pseudomonas aeruginosa
Cohn F (1872)
Cohn, F. "Untersuchungen uber Bakterien." Beitrage zur Biologie der Pflanzen, 1875 1 (Heft 2) (1872) 1:127-224. [No PubMed record available.]
Flügge C (1886)
Flügge, C. Die Microorganismen. (1886) F.C.W. Vogel, Leipzig. [No PubMed record available.]
Lapage SP et al. (1992) (reference with type strain information)
Lapage, S.P., Sneath, P.H.A., Lessel, E.F., Skerman, V.B.D., Seeliger, H.P.R., and Clark, W.A. "International Code of Nomenclature of Bacteria (1990 revision)." American Society for Microbiology, Washington, D.C. (1992). [No PubMed record available.]
Lehmann KB & Neumann R (1896)
Lehman, K.B., and Neumann, R. Atlas und Grundriss der Bakeriologie und Lehrbuch der speziellen bakteriologischen Diagnositk. 1st Ed., (1896) J.F. Lehmann, Munchen. [No PubMed record available.]
Migula W (1895)
Migula, W. "Bacteriaceae (Stabchenbacterien)." In: Engler and Prantl (Editors), Die Naturlichen Pflanzenfamilien. (1895) W. Engelmann, Leipzig, Teil I Abt. 1a, pp.20-30. [No PubMed record available.]
Migula W (1900)
Migula, W. System der Bakterien, Vol. 2. (1900) Gustav Fischer, Jena. [No PubMed record available.]
Schroeter J (1872)
Schroeter, J. "Uber einige durch Bacterien gebildete Pigmente. (1872)". In: F. Cohn (ed.), Beitrage zur Biologie der Pflanzen. J.U. Kern's Verlag, Breslau, 1875, pp. 109-126. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Trevisan V (1885)
Trevisan, V. "Caratteri di alcuni nuovi generi di Batteriaceae [Characteristics of some new genera of Bacteriaceae]." Atti. Accad. Fis.-Med.-Stat. Milano (Ser 4) (1885) 3:92-106. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pseudomonas aeruginosa meta-databases BacDive
176 records from this provider organism-specific BioCyc
dryaddb supplemental materials Dryad Digital Repository
Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
102 records from this provider organism-specific Genomes On Line Database
Pseudomonas aeruginosa culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
678 records from this provider organism-specific Integrated Microbial Genomes
Pseudomonas aeruginosa taxonomy/phylogenetic Lifemap
Pseudomonas Genome Project taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
3 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Wikipedia taxonomy/phylogenetic iPhylo
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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