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Taxonomy browser (Bacteroides ovatus)

Bacteroides ovatus

Taxonomy ID: 28116 (for references in articles please use NCBI:txid28116)
current name
Bacteroides ovatus Eggerth and Gagnon 1933 (Approved Lists 1980) emend. Hahnke et al. 2016, nom. approb. 1)
type strain of Bacteroides ovatus: ATCC:8483, BCRC:10623, CCUG:4943, CIP:103756, DSM:1896, JCM:5824, NCTC:11153
homotypic synonym:
"Pasteurella ovata" (Eggerth and Gagnon 1933) Prevot 1938, effective name 2)
"Pseudobacterium ovatum" (Eggerth and Gagnon 1933) Krasil'nikov 1949, effective name 2)
"Bacteroides fragilis subsp. ovatus" (Eggerth and Gagnon 1933) Holdeman and Moore 1970, effective name 2)
includes:
bacterium NLAE-zl-C11
bacterium NLAE-zl-C34
bacterium NLAE-zl-C500
bacterium NLAE-zl-C57
bacterium NLAE-zl-H304
bacterium NLAE-zl-H361
bacterium NLAE-zl-H59
bacterium NLAE-zl-H73
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 48,515 46,319 338
Protein 1,269,642 1,223,700 -
Structure 82 19 -
Genome 1 1 -
Popset 15 15 -
GEO Datasets 695 51 -
PubMed Central 1,020 1,020 -
Gene 15,370 15,370 -
SRA Experiments 386 296 -
Protein Clusters 4,507 4,507 -
Identical Protein Groups 143,691 137,303 -
Bio Project 71 61 -
Bio Sample 1,483 1,395 17
Bio Systems 157 157 -
Assembly 278 270 5
Probe 10 10 -
PubChem BioAssay 38 37 -
Taxonomy 9 1 -

Notes:

Comments and References:

Cato EP & Johnson JL (1976)
Cato, E.P., and Johnson, J.L. "Reinstatement of species rank for Bacteroides fragilis, B. ovatus, B. distasonis, B. thetaiotaomicron, and B. vulgatus: Designation of neotype strains for Bacteroides fragilis (Veillon and Zuber) Castellani and Chalmers and Bacteroides thetaiotaomicron (Distaso) Castellani and Chalmers." Int. J. Syst. Bacteriol. (1976) 26:230-237. [No PubMed record available.]
Eggerth AH & Gagnon BH (1933), other link:http://jb.asm.org/content/25/4/389.long
Eggerth, A.H., and Gagnon, B.H. "The bacteroides of human feces." J. Bacteriol. (1933) 25:389-413. [No abstract available.]
Hahnke R et al. (2016)
Hahnke, R.L., Meier-Kolthoff, J.P., GarcIa-Lopez, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Goker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
Holdeman LV & Moore WEC (1970b)
Holdeman, L.V., and Moore, W.E.C. "Bacteroides." In: E.P. Cato, C.S. Cummins, L.V. Holdeman, J.L. Johnson, W.E.C. Moore, R.M. Smibert, and L.DS. Smith (eds.), Outline of Clinical Methods in Anaerobic Bacteriology, 2nd revision, Virginia Polytechnic Institute, Anaerobe Laboratory, Blacksburg, Virginia, (1970). pp. 33-44. [No PubMed record available.]
Krasil'nikov NA (1949)
Krasil'nikov, N.A.: Guide to the Bacteria and Actinomycetes [Opredelitelv Bakterii i Actinomicetov], (1949). Akad. Nauk SSSR, Moscow, pp. 1-830. [No PubMed record available.]
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67:2081-2086.
Prevot AR (1938)
Prevot, A.R. "Etudes de systematique bacterienne." Ann. Inst. Pasteur (Paris) (1938) 60:285-307. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bacteroides ovatus meta-databases BacDive
Bacteroides ovatus KLE1656 organism-specific BioCyc
Bacteroides ovatus Eggerth and Gagnon 1933 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
27 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bacteroides ovatus culture/stock collections Global Catalogue of Microorganisms
11 records from provider organism-specific Integrated Microbial Genomes
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.
Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. [Full text] [PubMed]


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