Taxonomy browser Taxonomy Browser (Ruegeria pomeroyi DSS-3)

Entrez records
Database name	Direct links	Subtree links	Links from type
BioProject	47	47	-
BioSample	141	141	-
GEO DataSets	90	90	-
Gene	8,849	8,849	-
Identical Protein Groups	5,269	5,269	-
Nucleotide	437	437	11
PubChem BioAssay	1	1	-
Protein	9,562	9,562	-
SRA	78	78	-
Structure	40	40	-
Taxonomy	1	1	-

Ruegeria pomeroyi DSS-3

Taxonomy ID: 246200 (for references in articles please use NCBI:txid246200)

current name

Ruegeria pomeroyi DSS-3

equivalent:

Ruegeria pomeroyi strain DSS-3

Ruegeria pomeroyi str. DSS-3

NCBI BLAST name: a-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym Silicibacter pomeroyi DSS-3

Lineage(full): cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Ruegeria; Ruegeria pomeroyi

Comments and References:

genome sequence

Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Moran MA et al. (2004)

Moran, M.A., Buchan, A., Gonzalez, J.M., Heidelberg, J.F., Whitman, W.B., Kiene, R.P., Henriksen, J.R., King, G.M., Belas, R., Fuqua, C., Brinkac, L., Lewis, M, Johri, S., Weaver, B., Pai, G., Eisen, J.A., Rahe, E., Sheldon, W.M., Ye, W., Miller, T.R., Carlton, J., Rasko, D.A., Paulsen, I.T., Ren, Q., Daugherty, S.C., Deboy, R.T., Dodson, R.J., Durkin, A.S., Madupu, R., Nelson, W.C., Sullivan, S.A., Rosovitz, M.J., Haft, D.H., Selengut, J., and Ward, N. "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment." Nature (2004) 432:910-913.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Ruegeria pomeroyi type strain (BD-ID 13783)	meta-databases	BacDive
Ruegeria pomeroyi DSS-3	organism-specific	BioCyc
Ruegeria pomeroyi DSS-3	organism-specific	BioCyc
Ruegeria pomeroyi DSS-3	organism-specific	BioCyc
Ruegeria pomeroyi DSS-3	organism-specific	BioCyc
GOLD: Go0000514	organism-specific	Genomes On Line Database
637000267: Ruegeria pomeroyi DSS-3	organism-specific	Integrated Microbial Genomes
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.