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Taxonomy browser (Akkermansia muciniphila)

Akkermansia muciniphila

Taxonomy ID: 239935 (for references in articles please use NCBI:txid239935)
current name
Akkermansia muciniphila Derrien et al. 2004 emend. Hahnke et al. 2016
type strain of Akkermansia muciniphila: ATCC:BAA:835, CIP:107961, personal::Muc
includes:
Akkermansia sp. YL44
NCBI BLAST name: verrucomicrobia
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; PVC group; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia
   Entrez records   
Database name Subtree links Direct links
Nucleotide 8,626 8,618
Protein 304,175 301,899
Structure 3 -
Genome 1 1
Popset 4 4
GEO Datasets 3 -
PubMed Central 1,491 1,491
Gene 4,565 1
SRA Experiments 102 54
Protein Clusters 782 782
Identical Protein Groups 59,608 59,325
Bio Project 67 59
Bio Sample 252 212
Bio Systems 150 -
Assembly 135 134
Probe 1 -
Taxonomy 2 1

Comments and References:

Derrien M et al. (2004)
Derrien, M., Vaughan, E.E., Plugge, C.M., and de Vos, W.M. "Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium." Int. J. Syst. Evol. Microbiol. (2004) 54:1469-1476.
Hahnke R et al. (2016)
Hahnke, R.L., Meier-Kolthoff, J.P., GarcIa-Lopez, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Goker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67:2081-2086.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Akkermansia muciniphila meta-databases BacDive
Akkermansia muciniphila YL44 organism-specific BioCyc
Akkermansia muciniphila Derrien et al. 2004 taxonomy/phylogenetic Encyclopedia of life
GOLD Multi-Isolate Organism: Go0454689 organism-specific Genomes On Line Database
10 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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