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Taxonomy browser (Mycobacterium intracellulare subsp. chimaera)

Mycobacterium intracellulare subsp. chimaera

Taxonomy ID: 222805 (for references in articles please use NCBI:txid222805)
current name
Mycobacterium intracellulare subsp. chimaera (Tortoli et al. 2004) Nouioui et al. 2018 in [Nouioui I et al. (2018b), VALIDATION LIST No. 184 (2018)]
Mycobacterium chimaera Tortoli et al. 2004
type strain of Mycobacterium chimaera: CCUG:50989, CIP:107892, DSM:44623, JCM:14737, personal::FI-0169, NCTC:13781
NCBI BLAST name: high GC Gram+
Rank: subspecies
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC); Mycobacterium intracellulare
   Entrez records   
Database name Direct links Links from type
Nucleotide 4,055 275
Protein 97,895 -
Structure 2 -
Genome 1 -
Popset 35 -
PubMed Central 217 -
Gene 5,815 -
SRA Experiments 1,061 -
Protein Clusters 13 -
Identical Protein Groups 24,889 -
Bio Project 34 -
Bio Sample 1,033 4
Assembly 23 3
Taxonomy 1 -

Comments and References:

Nouioui I et al. (2018b), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
VALIDATION LIST No. 184 (2018), PubMed: abstract
Validation List No. 184: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2018) 68(11):3379-3393.
Pfaller S et al. (2017)
Pfaller, S., Tokarev, V., Kessler, C., McLimans, C., Gomez-Alvarez, V., Wright, J., King, D,. and Lamendella R. "Draft genome sequence of Mycobacterium chimaera type strain Fl-0169." Genome Announc. (2017) 5:e01620-16.
Tortoli E et al. (2004)
Tortoli, E., Rindi, L., Garcia, M.J., Chiaradonna, P., Dei, R., Garzelli, C., Kroppenstedt, R.M., Lari, N., Mattei, R., Mariottini, A., Mazzarelli, Murcia, M.I., G., Nanetti, A., Piccoli, P., and Scarparo, C. "Proposal to elevate the genetic variant MAC-A, included in the Mycobacterium avium complex, to species rank as Mycobacterium chimaera sp. nov." Int. J. Syst. Evol. Microbiol. (2004) 54:1291-1299.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium intracellulare subsp. chimaera meta-databases BacDive
2 records from this provider organism-specific BioCyc
Mycobacterium chimaera Tortoli et al. 2004 taxonomy/phylogenetic Encyclopedia of life
8 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Mycobacterium chimaera culture/stock collections Global Catalogue of Microorganisms
12 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium chimaera taxonomy/phylogenetic Lifemap
Wikipedia taxonomy/phylogenetic iPhylo
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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