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Taxonomy browser (Pseudomonas protegens Pf-5)

Pseudomonas protegens Pf-5

Taxonomy ID: 220664 (for references in articles please use NCBI:txid220664)
current name
Pseudomonas protegens Pf-5
equivalent:
Pseudomonas protegens strain Pf-5
NCBI BLAST name: g-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Pseudomonas fluorescens Pf-5
heterotypic synonym
Pseudomonas sp. Pf-5
equivalent:
Pseudomonas protegens str. Pf-5
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas protegens
   Entrez records   
Database name Direct links
Nucleotide 337
Protein 13,365
Structure 52
Genome 1
Popset 10
GEO Datasets 33
Gene 6,642
SRA Experiments 66
Identical Protein Groups 6,812
Bio Project 43
Bio Sample 92
Bio Systems 272
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Paulsen IT et al. (2005)
Paulsen, I.T., Press, C.M., Ravel, J., Kobayashi, D.Y., Myers, G.S., Mavrodi, D.V., DeBoy, R.T., Seshadri, R., Ren, Q., Madupu, R., Dodson, R.J., Durkin, A.S., Brinkac, L.M., Daugherty, S.C., Sullivan, S.A., Rosovitz, M.J., Gwinn, M.L., Zhou, L., Schneider, D.J., Cartinhour, S.W., Nelson, W.C., Weidman, J., Watkins, K., Tran, K., Khouri, H., Pierson, E.A., Pierson, L.S. 3rd, Thomashow, L.S., and Loper, J.E. "Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5." Nat. Biotechnol. (2005) 23:873-878. [Erratum: Nat. Biotechnol. (2006) 24:466.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pseudomonas protegens meta-databases BacDive
Pseudomonas protegens Pf-5 organism-specific BioCyc
GOLD: Go0000479 organism-specific Genomes On Line Database
637000220: Pseudomonas protegens Pf-5 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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