Taxonomy browser (Streptomyces griseus)

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Taxonomy browser (Streptomyces griseus)

Streptomyces griseus

Taxonomy ID: 1911 (for references in articles please use NCBI:txid1911)

current name

Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 (Approved Lists 1980) emend. Liu et al. 2005, nom. approb.¹⁾

type strain of Streptomyces griseus: CGMCC :4.1419, ATCC :23345, ATCC :23921, CBS :905.68, BCRC :13478, CCT:4836, CCUG :11104, CECT:3330, CFBP:4546, CIP:105124, DSM :40236, HAMBI:2315, IFO :12875, NBRC :12875, IFO :15744, NBRC :15744, JCM :4047, JCM :4644, KCTC :9080, KCTC :9135, BCCM/LMG :19302, NCIMB:13023, NCTC :13033, NRRL :B-2682, NRRL-ISP:5236, PCM:2331, RIA:1176, VKM:Ac:800, ISP:5236, KACC:20084

homotypic synonym:

"Actinomyces griseus" Krainsky 1914, effective name²⁾

Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 emend. Liu et al. 2005 emend. Nouioui et al. 2018, emended name³⁾ in [Nouioui I et al. (2018c)]

includes:

Streptomyces sp. AP19-1

Streptomyces sp. AP19-2

Streptomyces sp. DSM 40932

Streptomyces sp. WXC19-1

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Streptomyces setonii (Millard and Burr 1926) Waksman 1953 (Approved Lists 1980) emend. Kim et al. 2012, nom. approb.⁴⁾

type strain of Streptomyces setonii: ATCC :25497, CGMCC :4.1367, CBS :105.27, CBS :957.69, CFBP:4549, CIP:105279, DSM :40395, ICMP :12543, IFO :13085, NBRC :13085, JCM :4226, JCM :4516, KCTC :9144, NRRL :B-2555, NRRL-ISP:5395, RIA:1277

homotypic synonym:

"Actinomyces setonii" Millard and Burr 1926, effective name⁵⁾

heterotypic synonym

Streptomyces cavourensis subsp. washingtonensis Skarbek and Brady 1978 (Approved Lists), nom. approb.⁶⁾

type strain of Streptomyces cavourensis subsp. washingtonensis: NRRL :B-8030, ATCC :27732, NBRC :15391, IFO :15391, KCC:S-0967, CGMCC :4.1635, DSM :41423, JCM :4967, personal::AUW-83

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces griseus group; Streptomyces griseus subgroup

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	21,607	11,969	1,804
Protein	138,659	111,933	-
Structure	79	76	-
Genome	1	1	-
Popset	99	99	-
GEO Datasets	74	43	-
PubMed Central	3,343	3,343	-
Gene	15,015	6,876	-
SRA Experiments	63	45	-
Protein Clusters	2,993	2,993	-
Identical Protein Groups	117,534	86,964	-
BioProject	42	33	-
BioSample	260	216	6
Assembly	74	51	-
PubChem BioAssay	28	28	-
Taxonomy	6	1	-

Notes:

1) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
4) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
5) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
6) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

Gordan RE & Horan AC (1968)

Gordon, R.E., and Horan, A.C. "A piecemeal description of Streptomyces griseus (Krainsky) Waksman and Henrici." J. Gen. Microbiol. (1968) 50:223-233. [No abstract available.]

Guo Y et al. (2008)

Guo, Y., Zheng, W., Rong, X., and Huang, Y. "A multilocus phylogeny of the Streptomyces griseus 16S rRNA gene clade: use of multilocus sequence analysis for streptomycete systematics." Int. J. Syst. Evol. Microbiol. (2008) 58:149-159.

Kim KO et al. (2012)

Kim, K.-O., Shin, K.-S., Kim, M.N., Shin, K.-S., Labeda, D.P., Han, J.-H., and Kim, S.B. "Reassessment of the status of Streptomyces setonii and reclassification of Streptomyces fimicarius as a later synonym of Streptomyces setonii and Streptomyces albovinaceus as a later synonym of Streptomyces globisporus based on combined 16S rRNA/gyrB gene sequence analysis." Int. J. Syst. Evol. Microbiol. (2012) 62:2978-2985.

Krainsky A (1994)

Krainsky, A. "Die Aktinomyceten und ihren Bedeutung in der Natur." Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. II (1914) 41:649-688. [No PubMed record available.]

Liu Z et al. (2005b)

Liu, Z., Shi, Y., Zhang, Y., Zhou, Z., Lu, Z., Li, W., Huang, Y., Rodriguez, C., and Goodfellow, M. "Classification of Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 and related species and the transfer of 'Microstreptospora cinerea' to the genus Streptomyces as Streptomyces yanii sp. nov." Int. J. Syst. Evol. Microbiol. (2005) 55:1605-1610. Published online 1 March 2005. doi:10.1099/ijs.0.63654-0

Millard WA & Burr S (1926)

Millard, W.A., and Burr, S. "A study of twenty-four strains of Actinomyces and their relation to types of common scab of potato." Ann. Appl. Biol. (1926) 13:580-644. [No PubMed record available.]

Rong X & Huang Y (2010)

Rong, X., and Huang, Y. "Taxonomic evaluation of the Streptomyces griseus clade using multilocus sequence analysis and DNA-DNA hybridization, with proposal to combine 29 species and three subspecies as 11 genomic species." Int. J. Syst. Evol. Microbiol. (2010) 60:696-703. [N.B.: the authors incorrectly state that Streptomyces californicus is a later heterotypic synonym of Streptomyces puniceus. In fact, the reverse is true.]

Skarbek JD & Brady LR (1978)

Skarbek, J.D., and Brady, L.R. "Streptomyces cavourensis sp. nov. (nom. rev.) and Streptomyces cavourensis subsp. washingtonensis subsp. nov., a chromomycin subspecies." Int. J. Syst. Bacteriol. (1978) 28:45-53. [No PubMed record available.]

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Skerman VBD et al. (1980) (Streptomyces cavourensis subsp. washingtonensis)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Skerman VBD et al. (1980) (Streptomyces setonii)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Waksman SA & Henrici AT (1948b)

Waksman, S.A., and Henrici, A.T. "Family III. Streptomycetaceae Waksman and Henrici." IN: Breed, Murray, and Hitchens (Eds.), Bergey's Manual of Determinative Bacteriology, 6th Ed. (1948). The Williams and Wilkins Co., Balitmore. pp. 929-980. [No PubMed record available.]

Waksman SA & Lechevalier HA (1953)

Waksman, S.A., and Lechevalier, H.A. (Eds.): Guide to the Classification and Identification of the Actinomycetes and Their Antibiotics. The Williams & Wilkins Co., Baltimore, 1953, pp. 1-246. [No PubMed record available.]

Wu X et al. (2008)

Wu, X., Wen, Y., Qian, C., Li, O., Fang, H., and Chen, W. "Taxonomic study of a chromomycin-producing strain and reclassification of Streptomyces cavourensis subsp. washingtonensis as a later synonym of Streptomyces griseus." Int. J. Syst. Evol. Microbiol. (2008) 58:2783-2787.

Young JM et al. (1996) (reference with type strain information)

Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Streptomyces griseus	meta-databases	BacDive
GOLD: 4 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Streptomyces griseus	culture/stock collections	Global Catalogue of Microorganisms
9 records from this provider	organism-specific	Integrated Microbial Genomes
Streptomyces griseus \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Wikipedia	taxonomy/phylogenetic	iPhylo

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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov