Taxonomy browser (Mycobacterium tuberculosis)

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Taxonomy browser (Mycobacterium tuberculosis)

Mycobacterium tuberculosis

Taxonomy ID: 1773 (for references in articles please use NCBI:txid1773)

current name

Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980) emend. Riojas et al. 2018, nom. approb.¹⁾

type strain of Mycobacterium tuberculosis: ATCC :27294, personal::H37Rv, NCTC :7416, ATCC :25618, ATCC :9360, CCUG :37357, CCUG :38148, CIP:104475, CIP:64.31, CNCTC:7301, NCTC :13144

homotypic genbank synonym:

Mycobacterium tuberculosis variant tuberculosis

homotypic synonym:

"Bacterium tuberculosis" Zopf 1883, effective name²⁾

"Bacillus tuberculosis" (Zopf 1883) Klein 1884, effective name²⁾

NCBI BLAST name: high GC Gram+
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Mycobacterium tuberculosis typus humanus" Lehmann and Neumann 1907

heterotypic synonym

"Mycobacterium tuberculosis var. hominis" Bergey et al. 1934, effective name²⁾

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	1,469,049	1,236,111	2,777
Protein	19,623,095	12,417,093	-
Structure	2,825	1,301	-
Genome	6	1	-
Popset	377	363	-
Conserved Domains	4	4	-
GEO Datasets	6,376	3,060	-
PubMed Central	68,409	64,514	-
Gene	127,633	1	-
SRA Experiments	96,618	78,287	-
GEO Profiles	22,220	16,198	-
Protein Clusters	2,880	2,880	-
Identical Protein Groups	719,726	660,879	-
Bio Project	3,640	988	-
Bio Sample	100,169	83,190	2,595
Bio Systems	5,659	583	-
Assembly	6,967	4,968	9
Probe	543	460	-
PubChem BioAssay	9,298	6,115	-
Taxonomy	2,915	1	-

Notes:

1) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Bacteria (Bacteriological Code).

Comments and References:

Lehmann KB & Neumann R (1896)

Lehman, K.B., and Neumann, R. Atlas und Grundriss der Bakeriologie und Lehrbuch der speziellen bakteriologischen Diagnositk. 1st Ed., (1896) J.F. Lehmann, Munchen. [No PubMed record available.]

Riojas MA et al. (2018)

Riojas, M.A., McGough, K.J., Rider-Riojas, C.J., Rastogi, N., and Hazbon, M.H. "Phylogenomic analysis of the species of the Mycobacterium tuberculosis complex demonstrates that Mycobacterium africanum, Mycobacterium bovis, Mycobacterium caprae, Mycobacterium microti and Mycobacterium pinnipedii are later heterotypic synonyms of Mycobacterium tuberculosis." Int. J. Syst. Evol. Microbiol. (2018) 68:324-332.

Runyon EH et al. (1967)

Runyon, E.H., et al. "Mycobacterium tuberculosis, M. bovis and M. microti species descriptions." Zentralbl. Bakteriol., I Abt., Orig. (1967) 204:405-413. [No PubMed record available.]

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Zopf W (1883)

Zopf, W.: Die Spaltpilze. Edward Trewendt, Breslau, 1883, pp. 1-100. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Mycobacterium africanum	meta-databases	BacDive
16 records from this provider	organism-specific	BioCyc
dryaddb	supplemental materials	Dryad Digital Repository
107 records from this provider	organism-specific	Genomes On Line Database
Mycobacterium tuberculosis	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
583 records from this provider	organism-specific	Integrated Microbial Genomes
Mycobacterium tuberculosis	taxonomy/phylogenetic	Lifemap
TubercuList	taxonomy/phylogenetic	NCBI taxonomy bookmarks
Bacillus tuberculosis	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases
Sanger	companies/research institutes	The Sanger Centre
Mycobacterium tuberculosis	taxonomy/phylogenetic	TreeBase
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.
Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. [Full text] [PubMed]

Comments and questions to info@ncbi.nlm.nih.gov

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