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Taxonomy browser (Mycobacterium tuberculosis)

Mycobacterium tuberculosis

Taxonomy ID: 1773 (for references in articles please use NCBI:txid1773)

Scientific name: Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980) emend. Riojas et al. 2018, nom. approb.¹⁾

type strain of Mycobacterium tuberculosis: ATCC:27294
type strain of Mycobacterium tuberculosis: personal::H37Rv
type strain of Mycobacterium tuberculosis: NCTC:7416
type strain of Mycobacterium tuberculosis: ATCC:25618
type strain of Mycobacterium tuberculosis: ATCC:9360
type strain of Mycobacterium tuberculosis: CCUG:37357
type strain of Mycobacterium tuberculosis: CCUG:38148
type strain of Mycobacterium tuberculosis: CIP:104475
type strain of Mycobacterium tuberculosis: CIP:64.31
type strain of Mycobacterium tuberculosis: CNCTC:7301
type strain of Mycobacterium tuberculosis: NCTC:13144

homotypic synonym: "Bacterium tuberculosis" Zopf 1883, effective name²⁾

homotypic synonym: "Bacillus tuberculosis" (Zopf 1883) Klein 1884, effective name²⁾

homotypic genbank synonym: Mycobacterium tuberculosis variant tuberculosis

Inherited blast name: high GC Gram+
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

synonym:	"Mycobacterium tuberculosis typus humanus" Lehmann and Neumann 1907
synonym:	"Mycobacterium tuberculosis var. hominis" Bergey et al. 1934, effective name²⁾

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex

Entrez records
Database name	Subtree links	Direct links
Nucleotide	1,390,227	1,166,761
Protein	18,749,020	11,630,186
Structure	2,419	1,177
Genome	6	1
Popset	314	307
Conserved Domains	2	2
GEO Datasets	5,373	2,445
PubMed Central	49,627	46,671
Gene	127,436	1
SRA Experiments	60,699	49,425
GEO Profiles	22,220	16,198
Protein Clusters	2,880	2,880
Identical Protein Groups	601,052	546,470
Bio Project	3,219	699
Bio Sample	64,171	54,020
Bio Systems	5,659	583
Assembly	6,579	4,633
Probe	543	460
PubChem BioAssay	7,178	3,777
Taxonomy	2,915	1

Notes:

1) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Bacteria (Bacteriological Code).

Comments and References:

Lehmann KB & Neumann R (1896): Lehman, K.B., and Neumann, R. Atlas und Grundriss der Bakeriologie und Lehrbuch der speziellen bakteriologischen Diagnositk. 1st Ed., (1896) J.F. Lehmann, Munchen. [No PubMed record available.]

Riojas MA et al. (2018): Riojas, M.A., McGough, K.J., Rider-Riojas, C.J., Rastogi, N., and Hazbon, M.H. "Phylogenomic analysis of the species of the Mycobacterium tuberculosis complex demonstrates that Mycobacterium africanum, Mycobacterium bovis, Mycobacterium caprae, Mycobacterium microti and Mycobacterium pinnipedii are later heterotypic synonyms of Mycobacterium tuberculosis." Int. J. Syst. Evol. Microbiol. (2018) 68:324-332.

Runyon EH et al. (1967): Runyon, E.H., et al. "Mycobacterium tuberculosis, M. bovis and M. microti species descriptions." Zentralbl. Bakteriol., I Abt., Orig. (1967) 204:405-413. [No PubMed record available.]

Skerman VBD et al. (1980): Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Zopf W (1883): Zopf, W.: Die Spaltpilze. Edward Trewendt, Breslau, 1883, pp. 1-100. [No PubMed record available.]

Genome Information

Trace records (raw single-pass reads of DNA sequence)
Sequencing Center Name
Record counts per type
OTHER	PCR	PRIMERWALK	TRANSPOSON	WGS	ALL
BI - Broad Insititute
20,530	1,674	10,123	82,784	1,596,218	1,711,329
Totals per type
20,530	1,674	10,123	82,784	1,596,218	1,711,329

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
12 records from this provider	organism-specific	BioCyc
107 records from this provider	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Mycobacterium tuberculosis	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
514 records from this provider	organism-specific	Integrated Microbial Genomes
Mycobacterium tuberculosis	taxonomy/phylogenetic	Lifemap
TubercuList	taxonomy/phylogenetic	NCBI taxonomy bookmarks
Mycobacterium tuberculosis (taxon passport)	culture/stock collections	StrainInfo
Bacillus tuberculosis	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases
Sanger	companies/research institutes	The Sanger Centre
Mycobacterium tuberculosis	taxonomy/phylogenetic	TreeBase
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Comments and questions to info@ncbi.nlm.nih.gov

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