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Taxonomy browser (Treponema pallidum subsp. pallidum)

Treponema pallidum subsp. pallidum

Taxonomy ID: 161 (for references in articles please use NCBI:txid161)
current name
"Treponema pallidum subsp. pallidum" (Schaudinn and Hoffmann 1905) Schaudinn 1905, effective name 1)
Treponema pallidum pallidum
Genbank common name: syphilis treponeme
NCBI BLAST name: spirochetes
Rank: subspecies
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; Treponema pallidum
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,641 1,459
Protein 62,661 53,504
Structure 22 1
Genome 1 1
Popset 71 71
Conserved Domains 3 3
PubMed Central 11 11
Gene 8,679 -
SRA Experiments 1,345 748
Identical Protein Groups 3,658 2,966
Bio Project 26 17
Bio Sample 1,257 645
Bio Systems 633 -
Assembly 67 58
Probe 256 21
Taxonomy 7 1


Comments and References:

Smibert RM (1984)
Smibert, R.M. "Genus III Treponema Schaudinn 1905, 1728AL" In: (ed.) N.R. Krieg and J.G. Holt. Bergey's Manual of Systematic Bacteriology, vol. 1 (1984) Williams and Wilkins, Baltimore. pp. 49-57. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Treponema pallidum X-4 organism-specific BioCyc
3 records from this provider organism-specific Genomes On Line Database
51 records from provider organism-specific Integrated Microbial Genomes
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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