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Taxonomy browser (Lactobacillus paracasei)

Lactobacillus paracasei

Taxonomy ID: 1597 (for references in articles please use NCBI:txid1597)
current name
Lactobacillus paracasei Collins et al. 1989
type strain of Lactobacillus paracasei: ATCC:25302, CCUG:32212, CIP:103918, DSM:5622, IFO:15889, JCM:8130, BCCM/LMG:13087, NBRC:15889, NCDO:151, NCIMB:700151
includes:
Lactobacillus sp. LBS3
Lactobacillus sp. O3
Lactobacillus sp. T16
Lactobacillus sp. T3
Lactobacillus sp. TD3
Lactobacillus sp. W-29B
Lactobacillus sp. X-3B
Lactobacillus sp. X24
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus casei group
   Entrez records   
Database name Subtree links Direct links
Nucleotide 50,134 23,209
Protein 498,243 354,368
Structure 12 2
Genome 1 1
Popset 165 162
GEO Datasets 87 61
PubMed Central 1,377 1,377
Gene 9,282 126
SRA Experiments 48 33
Protein Clusters 3,427 3,427
Identical Protein Groups 116,971 94,261
Bio Project 139 85
Bio Sample 205 147
Bio Systems 541 -
Assembly 168 117
Probe 11 11
PubChem BioAssay 1 -
Taxonomy 50 1

Comments and References:

Biavati B (2001)
Biavati, B. "International Committee on Systematic Bacteriology. Subcommittee on the taxonomy of the Bifidobacterium, Lactobacillus and related organisms. Minutes of the meetings, 26 and 29 August 1996, Budapest, Hungary." Int. J. Syst. Evol. Microbiol. (2001) 51:257-258. [No PubMed record available.] (Note: the proposal of Dicks et al. 1996 is supported by the subcommittee.)
Collins MD et al. (1989e)
Collins, M.D., Phillips, B.A., and Zanoni, P. "Deoxyribonucleic acid homology studies of Lactobacillus casei, Lactobacillus paracasei sp. nov., subsp. paracasei and subsp. tolerans, and Lactobacillus rhamnosus sp. nov., comb. nov." Int. J. Syst. Bacteriol. (1989) 39:105-108. [No PubMed record available.]
Dellaglio F et al. (1991)
Dellaglio, F., Dicks, L.M.T., Du Toit, M., and Torriani, S. "Designation of ATCC 334 in place of ATCC 393 (NCDO 161) as the neotype strain of Lactobacillus casei subsp. casei and rejection of the name Lactobacillus paracasei (Collins et al., 1989). Request for an opinion." Int. J. Syst. Bacteriol. (1991) 41:340-342. [No PubMed record available.]
Dellaglio F et al. (2002)
Dellaglio, F., Felis, G.E., and Torriani, S. "The status of the species Lactobacillus casei (Orla-Jensen 1916) Hansen and Lessel 1971 and Lactobacillus paracasei Collins et al. 1989. Request for an Opinion." Int. J. Syst. Evol. Microbiol. (2002) 52:285-287.
Dicks LM et al. (1996)
Dicks, L.M.T., Du Plessis, E.M., Dellaglio, F., and Lauer, E. "Reclassification of Lactobacillus casei subsp. casei ATCC 393 and Lactobacillus rhamnosus ATCC 15820 as Lactobacillus zeae nom. rev., designation of ATCC 334 as the neotype of L. casei subsp.casei, and rejection of the name Lactobacillus paracasei." Int. J. Syst. Bacteriol. (1996) 46:337-340. (Note: this proposal is rejected by the Judicial Commission in Opinion 82.)
Falsen E et al. (1999) (reference with type strain information)
Falsen, E., Pascual, C., Sjoden, B., Ohlen, M., and Collins, M.D. "Phenotypic and phylogenetic characterization of a novel Lactobacillus species from human sources: description of Lactobacillus iners sp. nov." Int. J. Syst. Bacteriol. (1999) 49:217-221.
Felis GE et al. (2001)
Felis, G.E., Dellaglio, F., Mizzi, L., and Torriani, S. "Comparative sequence analysis of a recA gene fragment brings new evidence for a change in the taxonomy of the Lactobacillus casei group." Int. J. Syst. Evol. Microbiol. (2001) 51:2113-2117.
JUDICIAL OPINION 82 (2008)
Judicial Commission. "The type strain of Lactobacillus casei is ATCC 393, ATCC 334 cannot serve as the type because it represents a different taxon, the name Lactobacillus paracasei and its subspecies names are not rejected and the revival of the name 'Lactobacillus zeae' contravenes Rules 51b (1) and (2) of the International Code of Nomenclature of Bacteria. Opinion 82." Int. J. Syst. Evol. Microbiol. (2008) 58:1764-1765.
Klein G (2001)
Klein, G. "International Committee on Systematic Bacteriology. Subcommittee on the taxonomy of Bifidobacterium, Lactobacillus and related organisms. Minutes of the meetings, 22 and 23 September 1999, Veldhoven, The Netherlands." Int. J. Syst. Evol. Microbiol. (2001) 51:259-261. [No PubMed record available.]
Mori K et al. (1997)
Mori, K., Yamazaki, K., Ishiyama, T., Katsumata, M., Kobayashi, K., Kawai, Y., Inoue, N., and Shinano, H. "Comparative sequence analyses of the genes coding for 16S rRNA of Lactobacillus casei-related taxa." Int. J. Syst. Bacteriol. (1997) 47:54-57.
Wayne LG et al. (1994) (re Dellaglio et al.)
Wayne, L.G. "Actions of the Judicial Commission of the International Committee on Systematic Bacteriology on requests for opinions published between January 1985 and July 1993." Int. J. Syst. Bacteriol. (1994) 44:177-178. (Note: the request of Dellaglio et al. (1991) is rejected.) [No PubMed record available.]

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12 records from this provider organism-specific Genomes On Line Database
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Lactobacillus paracasei culture/stock collections Global Catalogue of Microorganisms
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