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Taxonomy browser (Treponema denticola)

Treponema denticola

Taxonomy ID: 158 (for references in articles please use NCBI:txid158)
current name
Treponema denticola (ex Flugge 1886) Chan et al. 1993
type strain of Treponema denticola: ATCC:35405, CIP:103919, DSM:14222, JCM:8153
homotypic synonym:
"Spirochaete denticola" Flugge 1886, effective name 1)
Treponema denticola (ex Brumpt 1925) Chan et al. 1993
includes:
Treponema sp. ATCC 700768
Treponema sp. OMZ 830
NCBI BLAST name: spirochetes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Spirochaete dentium" Miller 1889, effective name 1)
heterotypic synonym
"Spirillum dentium" (Miller 1889) Sternberg 1892, effective name 1)
heterotypic synonym
"Spirochaeta dentium" (Miller 1889) Migula 1895, effective name 1)
heterotypic synonym
"Spironema dentium" (Miller 1889) Gross 1912, effective name 1)
heterotypic synonym
"Treponema dentium" (Miller 1889) Dobell 1912, effective name 1)
heterotypic synonym
"Treponema microdentium" Noguchi 1912, effective name 1)
heterotypic synonym
"Spirochaeta orthodonta" Hoffmann 1920, effective name 1)
heterotypic synonym
"Spirochaeta microdentium" (Noguchi 1912) Heim 1922, effective name 1)
heterotypic synonym
"Treponema dentium-stenogyratum" Pettit 1928, effective name 1)
heterotypic synonym
"Treponema orthodontum" (Hoffmann 1920) Noguchi 1928, effective name 1)
heterotypic synonym
"Spirochaeta ambigua" Seguin and Vinzent 1936, effective name 1)
heterotypic synonym
"Spirochaeta comandonii" Seguin and Vinzent 1936, effective name 1)
heterotypic synonym
"Treponema ambiguum" (Seguin and Vinzent 1936) Prevot 1940, effective name 1)
heterotypic synonym
"Treponema comandonii" (Seguin and Vinzent 1936) Prevot 1940, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Treponemataceae; Treponema
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 2,350 1,536 28
Protein 120,801 73,931 -
Structure 26 14 -
Genome 1 1 -
Popset 29 29 -
Conserved Domains 3 3 -
GEO Datasets 59 56 -
PubMed Central 3,639 3,639 -
Gene 2,939 3 -
SRA Experiments 70 25 -
Protein Clusters 2,985 2,985 -
Identical Protein Groups 46,338 42,635 -
BioProject 34 14 -
BioSample 189 154 18
Assembly 32 15 1
Taxonomy 19 1 -

Notes:

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Chan EC et al. (1993)
Chan, E.C., Siboo, R., Keng, T., Psarra, N., Hurley, R., Cheng, S.L., and Iugovaz, I. "Treponema denticola (ex Brumpt 1925) sp. nov., nom. rev., and identification of new spirochete isolates from periodontal pockets." Int. J. Syst. Bacteriol. (1993) 43:196-203.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Treponema denticola meta-databases BacDive
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Treponema denticola culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Spirochaeta dentium taxonomy/phylogenetic Integrated Taxonomic Information System
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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