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Taxonomy browser (Bacillus subtilis)

Bacillus subtilis

Taxonomy ID: 1423 (for references in articles please use NCBI:txid1423)
current name
Bacillus subtilis (Ehrenberg 1835) Cohn 1872
type strain of Bacillus subtilis: ATCC:6051, ATCC:6051-U, BCRC:10255, CCM:2216, CCUG:163 B, CFBP:4228, CIP:52.65, DSM:10, IAM:12118, IFO:13719, IFO:16412, IMET:10758, JCM:1465, BCCM/LMG:7135, NBRC:13719, NBRC:16412, NCAIM B.01095, NCCB:32009, NCCB:53016, NCCB:70064, NCDO:1769, NCIMB:3610, NCTC:3610, NRRL:B-4219, NRRL:NRS-1315, NRRL:NRS-744, VKM:B-501, personal::168, PNCM:1514, IFO:12210
homotypic synonym:
"Vibrio subtilis" Ehrenberg 1835, effective name 1)
includes:
Arthrobacter sp. CHR2P1B1-M
Bacillus sp. 10405
Bacillus sp. 15:2
Bacillus sp. AECSB01
Bacillus sp. AECSB04
Bacillus sp. AECSB05
Bacillus sp. AECSB06
Bacillus sp. AECSB07
Bacillus sp. AECSB08
Bacillus sp. AECSB12
Bacillus sp. AECSB13
Bacillus sp. AECSB14
Bacillus sp. HE08
Bacillus sp. BS4(2013)
Bacillus sp. BV3
Bacillus sp. BV5
Bacillus sp. BS9(2013)
Bacillus sp. JKR21
Bacillus sp. LB002
Bacillus sp. LKM-BL
Bacillus sp. PW16b
Bacillus sp. PW19
Bacillus sp. RSP-GLU
Bacillus sp. S2 BC-1
Bacillus sp. SWI06
Bacillus sp. UMX-03
Brevibacillus sp. BHR3P2B5-M
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Bacillus natto
heterotypic synonym
Bacillus uniflagellatus
in-part
Bacillus mesentericus
in-part
Bacillus subtilis/Bacillus globigii
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 72,447 61,351 1,118
Protein 1,974,349 1,532,737 -
Structure 1,865 1,214 -
Genome 1 1 -
Popset 1,743 1,731 -
Conserved Domains 8 4 -
GEO Datasets 4,649 2,846 -
PubMed Central 57,052 56,932 -
Gene 57,280 5,380 -
SRA Experiments 5,344 3,017 -
GEO Profiles 12,300 12,300 -
Protein Clusters 4,694 4,694 -
Identical Protein Groups 375,181 349,718 -
BioProject 949 655 -
BioSample 5,760 3,487 1,514
Assembly 625 485 16
PubChem BioAssay 3,800 3,656 -
Taxonomy 72 1 -

Notes:

Comments and References:

Cohn F (1872)
Cohn, F. "Untersuchungen uber Bakterien." Beitrage zur Biologie der Pflanzen, 1875 1 (Heft 2) (1872) 1:127-224. [No PubMed record available.]
Fritze D & Pukall R (2001)
Fritze, D., and Pukall, R. "Reclassification of bioindicator strains Bacillus subtilis DSM 675 and Bacillus subtilis DSM 2277 as Bacillus atrophaeus." Int. J. Syst. Evol. Microbiol. (2001) 51:35-7.
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Ehrenberg CG (1835)
Ehrenberg, C.G. "Dritter Beitrag zur Erkenntniss grosser Organisation in der Richtung des kleinsten Raumes." Physikalische Abhandlungen der Koeniglichen Akademie der Wissenschaften zu Berlin aus den Jahren 1833-1835 (1835). pp.143-336. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Bacillus subtilis meta-databases BacDive
44 records from this provider organism-specific BioCyc
dryaddb supplemental materials Dryad Digital Repository
Bacillus subtilis taxonomy/phylogenetic Encyclopedia of life
50 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bacillus subtilis culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
102 records from this provider organism-specific Integrated Microbial Genomes
Bacillus subtilis taxonomy/phylogenetic Lifemap
SubtiList taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Bacillus subtilis taxonomy/phylogenetic TreeBase
2 records from this provider taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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