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Taxonomy browser (Staphylococcus epidermidis)

Staphylococcus epidermidis

Taxonomy ID: 1282 (for references in articles please use NCBI:txid1282)
current name
Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916
type strain of Staphylococcus epidermidis: ATCC:14990, CCM:2124, CCUG:18000 A, CCUG:39508, CIP:81.55, DSM:20044, JCM:2414, BCCM/LMG:10474, NBRC:100911, NCAIM B.01066, NCTC:11047
homotypic synonym:
"Albococcus epidermidis" Winslow and Winslow 1908, effective name 1)
"Micrococcus epidermidis" (Winslow and Winslow 1908) Hucker 1924, effective name 1)
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Staphylococcus epidermidis albus" Welch 1891, effective name 1)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 389,078 366,441 311
Protein 1,500,278 1,275,515 -
Structure 91 29 -
Genome 1 1 -
Popset 456 456 -
Conserved Domains 2 1 -
GEO Datasets 334 297 -
PubMed Central 20,093 20,093 -
Gene 8,274 2,926 -
SRA Experiments 5,558 5,404 -
GEO Profiles 46,030 23,015 -
Protein Clusters 3,056 3,056 -
Identical Protein Groups 264,585 253,902 -
BioProject 424 310 -
BioSample 7,796 7,659 11
Assembly 3,807 3,669 6
PubChem BioAssay 2,423 2,269 -
Taxonomy 112 1 -

Notes:

Comments and References:

Cole K et al. (2019), other link:https://mra.asm.org/content/8/17/e00062-19
Cole, K., Foster, D., Russell, J.E., Golubchik, T., Llewelyn, M., Wilson, D.J., Crook, D., and Paul, J., Modernising Medical Microbiology Consortium. "Draft genome sequences of 64 type strains of 50 species and 25 subspecies of the genus Staphylococcus Rosenbach 1884." Microbiol. Resour. Announc. (2019) 8:e00062-19.
Schleifer KH & Kloos WE (1975)
Schleifer, K.H., and Kloos, W.E. "Isolation and characterization of staphylococci from human skin. I. Amended descriptions of Staphylococcus epidermidis and Staphylococcus saprophyticus,and descriptions of three new species: Staphylococcus cohnii, Staphylococcus haem, and Staphylococcus xylosus." Int. J. Syst. Bacteriol. (1975) 25:50-61. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Wieser M & Busse HJ (2000)
Wieser, M., and Busse, H.J. "Rapid identification of Staphylococcus epidermidis." Int. J. Syst. Evol. Microbiol. (2000) 50:1087-1093.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Staphylococcus epidermidis meta-databases BacDive
6 records from this provider organism-specific BioCyc
Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
31 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Staphylococcus epidermidis culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
67 records from this provider organism-specific Integrated Microbial Genomes
Staphylococcus epidermidis taxonomy/phylogenetic Integrated Taxonomic Information System
Staphylococcus epidermidis taxonomy/phylogenetic Lifemap
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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