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Taxonomy browser (Ruminococcus flavefaciens)

Ruminococcus flavefaciens

Taxonomy ID: 1265 (for references in articles please use NCBI:txid1265)
current name
Ruminococcus flavefaciens Sijpesteijn 1948
type strain of Ruminococcus flavefaciens: ATCC:19208
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 3,660 1,733
Protein 67,309 64,037
Structure 24 12
Genome 1 1
Popset 13 13
Conserved Domains 2 2
GEO Datasets 11 2
PubMed Central 558 558
Gene 2 2
SRA Experiments 25 14
Protein Clusters 2,083 2,083
Identical Protein Groups 44,549 44,124
Bio Project 25 14
Bio Sample 44 33
Assembly 27 19
Probe 26 26
PubChem BioAssay 4 4
Taxonomy 9 1

Comments and References:

Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Willems A & Collins MD (1995e)
Willems, A., and Collins, M.D. "Phylogenetic analysis of Ruminococcus flavefaciens, the type species of the genus Ruminococcus, does not support the reclassification of Streptococcus hansenii and Peptostreptococcus productus as ruminococci." Int. J. Syst. Bacteriol. (1995) 45:572-575.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ruminococcus flavefaciens Sijpesteijn 1948 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
6 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Ruminococcus flavefaciens culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
6 records from provider organism-specific Integrated Microbial Genomes
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

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