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Taxonomy browser (Rhodopseudomonas palustris)

Rhodopseudomonas palustris

Taxonomy ID: 1076 (for references in articles please use NCBI:txid1076)
current name
Rhodopseudomonas palustris (Molisch 1907) van Niel 1944 emend. Venkata Ramana et al. 2012
type strain of Rhodopseudomonas palustris: personal::ATH 2.1.6, ATCC:17001
homotypic synonym:
"Rhodobacillus palustris" Molisch 1907, effective name 1)
"Rhodomonas palustris" (Molisch 1907) Kluyver and van Niel 1936, effective name 2)
Rhodobacter palustris
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Rhodobacterium capsulatum" Molisch 1907, effective name 3)
heterotypic synonym
"Rhodovibrio parvus" Molisch 1907, effective name 4)
heterotypic synonym
Rhodopseudomonas rutila Akiba et al. 1983
type strain of Rhodopseudomonas rutila: personal::R1, ATCC:33872, DSM:8283, DSM:5869, JCM:2524
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Rhodopseudomonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 6,408 5,446 16
Protein 203,706 176,451 -
Structure 295 107 -
Genome 1 1 -
Popset 29 29 -
Conserved Domains 4 4 -
GEO Datasets 340 310 -
PubMed Central 2,406 2,406 -
Gene 54,686 9,944 -
SRA Experiments 431 333 -
Protein Clusters 6,882 6,882 -
Identical Protein Groups 109,148 103,169 -
BioProject 108 86 -
BioSample 416 340 10
Assembly 36 28 -
PubChem BioAssay 1 - -
Taxonomy 11 1 -

Notes:

Comments and References:

Akiba T et al. (1983)
Akiba, T., Usami, R., and Horikoshi, K. "Rhodopseudomonas rutila, a new species of nonsulfur purple photosynthetic bacteria." Int. J. Syst. Bacteriol. (1983) 33:551-556. [No PubMed record available.]
Hiraishi a et al. (1992)
Hiraishi, A., Santos, T.S., Sugiyama, J., and Komagata, K. "Rhodopseudomonas rutila is a later subjective synonym of Rhodopseudomonas palustris." Int. J. Syst. Bacteriol. (1992) 42:186-188. [No PubMed record available.]
Kluyver AJ & van Niel CB (1936)
Kluyver, A.J., and van Niel, C.B. "Prospects for a natural system of classification of bacteria." Zentralbl. Bakterol. Parasitenkd. Infectinskr. Hyg., Abt. II (1936) 94:369-403. [No PubMed record available.]
Robertson S et al. (2018)
Robertson, S., Rayyan, A., Meyer, T., and Kyndt, J. "Draft whole-genome sequence of the purple nonsulfur photosynthetic bacterium Rhodopseudomonas rutila R1." Microbiol. Resour. Announc. (2018) 7:e01267-18.
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Venkata Ramana V et al. (2012)
Venkata Ramana, V., Kalyana Chakravarthy, S., Shalem Raj, P., Vinay Kumar, B., Shobha, E., Ramaprasad, E.V.V., Sasikala, C., and Ramana, C.V. "Descriptions of Rhodopseudomonas parapalustris sp. nov., Rhodopseudomonas harwoodiae sp. nov. and Rhodopseudomonas pseudopalustris sp. nov., and emended description of Rhodopseudomonas palustris." Int. J. Syst. Evol. Microbiol. (2012) 62:1790-1798.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rhodopseudomonas palustris meta-databases BacDive
Rhodopseudomonas palustris (Molisch 1907) van Niel 1944 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 28 Organisms organism-specific Genomes On Line Database
Rhodopseudomonas palustris culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
33 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Rhodopseudomonas palustris (Molisch, 1907) van Niel, 1944 taxonomy/phylogenetic Ocean Biogeographic Information System
Rhodopseudomonas palustris (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Rhodopseudomonas palustris (Molisch, 1907) van Niel, 1944 taxonomy/phylogenetic World Register of Marine Species
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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