Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Baaleninema simplex PCC 7105)

Baaleninema simplex PCC 7105

Taxonomy ID: 102127 (for references in articles please use NCBI:txid102127)
current name
Baaleninema simplex PCC 7105
equivalent:
Geitlerinema catellasis PCC 7105
Geitlerinema sp. ATCC 29120 1)
Geitlerinema sp. PCC 7105
Oscillatoria williamsii MEV 2)
NCBI BLAST name: cyanobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Cyanobacteria/Melainabacteria group; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleaceae; Baaleninema; Baaleninema simplex
   Entrez records   
Database name Direct links Links from type
Nucleotide 295 295
Protein 4,838 -
Genome 1 -
SRA Experiments 4 -
Protein Clusters 2,153 -
Identical Protein Groups 4,838 -
Bio Project 2 -
Bio Sample 1 1
Assembly 1 1
Taxonomy 1 -

Notes:

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Samylina OS et al. (in press_2021), doi:10.1093/femsec/fiab104
Samylina, O.S., Sinetova, M.A., Kupriyanova, E.V., Starikov, A.Y., Sukhacheva, M.V., Dziuba, M.V., and Tourova, T.P. "Ecology and biogeography of the 'marine Geitlerinema' cluster and a description of Sodalinema orleanskyi sp. nov., Sodalinema gerasimenkoae sp. nov., Sodalinema stali sp. nov. and Baaleninema simplex gen. et sp. nov. (Oscillatoriales, Cyanobacteria)." FEMS Microbio.l Ecol. (in press)
Shih PM et al. (2013)
Shih, P.M., Wu, D., Latifi, A., Axen, S.D., Fewer, D.P., Talla, E., Calteau, A., Cai, F., Tandeau de Marsac, N., Rippka, R., Herdman, M., Sivonen, K., Coursin, T., Laurent, T., Goodwin, L., Nolan, M., Davenport, K.W., Han, C.S., Rubin, E.M., Eisen, J.A., Woyke, T., Gugger, M., and Kerfeld, C.A. "Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing." Proc. Natl. Acad. Sci. USA (2013) 110:1053-1058.
Van Baalen C (1962), doi:10.1515/botm.1962.4.1-2.129
Van Baalen, C. "Studies on marine blue-green algae." Botanica Marina (1962) 4(1-2):129-139.
Walter JM et al. (2017b)
Walter, J.M., Coutinho, F.H., Dutilh, B.E., Swings, J., Thompson, F.L., and Thompson, C.C. "Ecogenomics and taxonomy of Cyanobacteria phylum." Front. Microbiol. (2017) 8:2132.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Geitlerinema sp. PCC 7105 PCC 7105 organism-specific BioCyc
GOLD: Go0005072 organism-specific Genomes On Line Database
2510065011: Baaleninema simplex PCC 7105 organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers



Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]