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Taxonomy browser (Orchidaceae)

Orchidaceae

Taxonomy ID: 4747 (for references in articles please use NCBI:txid4747)
current name
Orchidaceae Juss., 1789, nom. cons. 1)
NCBI BLAST name: monocots
Rank: family
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name(s) orchid family
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales
   Entrez records   
Database name Subtree links Direct links
Nucleotide 840,184 -
Protein 310,583 -
Structure 2 -
Genome 271 -
Popset 2,096 406
GEO Datasets 222 -
PubMed Central 18,334 2,518
Gene 85,245 -
SRA Experiments 4,351 12
Protein Clusters 75 -
Identical Protein Groups 209,656 -
Bio Project 726 1
Bio Sample 4,149 11
Assembly 16 -
Probe 482 -
Taxonomy 11,863 1

Notes:

Comments and References:

APG IV (2016), doi:10.1111/boj.12385
The Angiosperm Phylogeny Group. 2016. An update of the Angiosperm Phylogeny Group classification of the orders and families of flowering plants: APG IV. Botanical Journal of the Linnean Society 181: 1-20. DOI: http://dx.doi.org/10.1111/boj.12385
APG III (2009), doi:10.1111/j.1095-8339.2009.00996.x
The Angiosperm Phylogeny Group. 2009. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III. Botanical Journal of the Linnean Society 161(2): 105-121. The APG III system incorporates molecular data and phylogenetic methods and represents the most up-to-date classification of flowering plants.
Stevens PF: Angiosperm Phylogeny Website
Stevens, P. F. (2001 onwards). Angiosperm Phylogeny Website. Version 12, July 2012 [and more or less continuously updated since].
Flora of China - Orchidaceae
Xinqi Chen, Liu Zhongjian, Guanghua Zhu, Kai-yung Lang, Zhanhe Ji, Yi-Bo Luo, Jin Xiaohua, Phillip J. Cribb, Jeffrey J. Wood, Stephan W. Gale, Paul Ormerod, Jaap J. Vermeulen, Howard P. Wood, Dudley Clayton & Alexandra Bell. Orchidaceae. 2009. In Wu, Z. Y., P. H. Raven & D. Y. Hong, eds. Flora of China. Vol. 25 (Orchidaceae). Science Press, Beijing, and Missouri Botanical Garden Press, St. Louis. Online at Flora of China: www.efloras.org
Chase MW et al. 2015, doi:10.1111/boj.12234
Chase MW, Cameron KM, Freudenstein JF, Pridgeon AM, Salazar G, van den Berg C, & Schuiteman A. 2015. An updated classification of Orchidaceae. Botanical Journal of the Linnean Soceity 177: 151-174. DOI: http://dx.doi.org/10.1111/boj.12234
Gustafsson AL et al. 2010
Gustafsson AL, Verola CF and Antonelli A. 2010. Reassessing the temporal evolution of orchids with new fossils and a Bayesian relaxed clock, with implications for the diversification of the rare South American genus Hoffmannseggella (Orchidaceae: Epidendroideae). BMC Evolutionary Biology 10: 177. doi: 10.1186/1471-2148-10-177
Haston E et al. 2007
Haston E, Richardson JE, Stevens PF, Chase, MW and Harris DJ. 2007. A linear sequence of Angiosperm Phylogeny Group II families. Taxon 56 (1): 7-12.
Chase MW et al. 2003
Chase MW, Freudenstein JF & Cameron KM. 2003. DNA data and Orchidaceae systematics: A new phylogenetic classification. In Dixon, K. W., Pell, S. P., Barrett, R. L., & Cribb, P. J. (eds), Orchid Conservation. Natural History Publications, Kota Kinabalu, Sabah, pp. 68-89.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Orchidaceae taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Orchidaceae taxonomy/phylogenetic Barcodes of Life
Orchidaceae taxonomy/phylogenetic CalPhotos
Orchidaceae taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Orchidaceae taxonomy/phylogenetic Lifemap
NPPI images National Plant Photographic Index
Orchidaceae taxonomy/phylogenetic TreeBase
Orchidaceae taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
Orchidaceae taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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