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Taxonomy browser (Algoriphagus machipongonensis)

Algoriphagus machipongonensis

Taxonomy ID: 388413 (for references in articles please use NCBI:txid388413)
Scientific name: Algoriphagus machipongonensis Alegado et al. 2013
type strain of Algoriphagus machipongonensis: ATCC:BAA:2233
type strain of Algoriphagus machipongonensis: DSM:24695
type strain of Algoriphagus machipongonensis: personal::PR1
includes: Algoriphagus sp. PR1
NCBI BLAST® name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus
   Entrez records   
Database name Direct links
Nucleotide 8
Protein 7,899
Genome 1
PubMed Central 27
Protein Clusters 2,840
Identical Protein Groups 4,257
Bio Project 2
Bio Sample 1
Assembly 1
Taxonomy 1

Comments and References:

Reference to PubMed documentAlegado RA et al. (2011)
Alegado, R.A., Ferriera, S., Nusbaum, C., Young, S.K., Zeng, Q., Imamovic, A., Fairclough, S.R., and King, N. "Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a colony-forming choanoflagellate." J. Bacteriol. (2011) 193:1485-1486.

Reference to PubMed documentAlegado RA et al. (2013)
Alegado, R.A., Grabenstatter, J.D., Zuzow, R., Morris, A., Huang, S.Y., Summons, R.E., and King, N. "Algoriphagus machipongonensis sp. nov., co-isolated with a colonial choanoflagellate." Int. J. Syst. Evol. Microbiol. (2013) 63:163-168.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
JCVI - J. Craig Venter Institute
50,413 50,413
Totals per type
50,413 50,413

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Algoriphagus machipongonensis meta-databases BacDive
GOLD: Go0008455 organism-specific Genomes On Line Database
640612202: Algoriphagus machipongonensis PR1 organism-specific Integrated Microbial Genomes
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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