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Taxonomy browser (Ralstonia solanacearum)

Ralstonia solanacearum

Taxonomy ID: 305 (for references in articles please use NCBI:txid305)
Scientific name: Ralstonia solanacearum (Smith 1896) Yabuuchi et al. 1996 emend. Safni et al. 2014
type strain of Ralstonia solanacearum: personal::A. Kelman 60-1
type strain of Ralstonia solanacearum: ATCC:11696
type strain of Ralstonia solanacearum: CCUG:14272
type strain of Ralstonia solanacearum: CFBP:2047
type strain of Ralstonia solanacearum: CIP:104762
type strain of Ralstonia solanacearum: DSM:9544
type strain of Ralstonia solanacearum: ICMP:5712
type strain of Ralstonia solanacearum: JCM:10489
type strain of Ralstonia solanacearum: BCCM/LMG:2299
type strain of Ralstonia solanacearum: NCAIM B.01459
type strain of Ralstonia solanacearum: NCPPB:325
type strain of Ralstonia solanacearum: NRRL:B:3212
homotypic synonym: "Bacillus solanacearum" Smith 1896, effective name 1)
homotypic synonym: Pseudomonas solanacearum (Smith 1896) Smith 1914 (Approved Lists 1980), nom. approb. 2)
homotypic synonym: Burkholderia solanacearum (Smith 1896) Yabuuchi et al. 1993
NCBI BLAST® name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia
   Entrez records   
Database name Subtree links Direct links
Nucleotide 41,854 30,213
Protein 595,582 523,835
Structure 34 27
Genome 1 1
Popset 231 231
GEO Datasets 56 19
PubMed Central 2,605 2,605
Gene 42,833 1,640
SRA Experiments 121 111
Protein Clusters 5,725 5,725
Identical Protein Groups 158,743 147,026
Bio Project 150 122
Bio Sample 707 477
Bio Systems 1,431 -
Assembly 126 103
Probe 22 4
PubChem BioAssay 49 47
Taxonomy 21 1

Notes:

Comments and References:

Reference to PubMed documentEuzeby JP & Kudo T (2001)
Euzeby, J.P., and Kudo, T. "Corrigenda to the Validation Lists." Int. J. Syst. Evol. Microbiol. (2001) 51:1933-1938.

Reference to PubMed documentSafni I et al. (2014)
Safni, I., Cleenwerck, I., De Vos, P., Fegan, M., Kappler, U., and Sly, L. "Polyphasic taxonomic revision of the Ralstonia solanacearum species complex: proposal to emend the descriptions of Ralstonia solanacearum and Ralstonia syzygii and reclassify current R. syzygii strains as Ralstonia syzygii subsp. syzygii subsp. nov., R. solanacearum phylotype IV strains as Ralstonia syzygii subsp. indonesiensis subsp. nov., banana blood disease bacterium strains as Ralstonia syzygii subsp. celebesensis subsp. nov. and R. solanacearum phylotypes I and III strains as Ralstonia pseudosolanacearum sp. nov." Int. J. Syst. Evol. Microbiol. (2014) 64:3087-3103.

Skerman VBD et al. (1980) (Pseudomonas solanacearum)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [See 'Approved Lists of Bacterial Names' LinkOut below.]

Reference to PubMed documentTaghavi M et al. (1996)
Taghavi, M., Hayward, C., Sly, L.I., and Fegan, M. "Analysis of the phylogenetic relationships of strains of Burkholderia solanacearum, Pseudomonas syzygii, and the blood disease bacterium of banana based on 16S rRNA gene sequences." Int. J. Syst. Bacteriol. (1996) 46:10-15.

Nota BeneVALIDATION LIST No. 45 (1993) (Burkholderia solanacearum)
VALIDATION LIST No. 45. Int. J. Syst. Bacteriol. (1993) 43:398-399.

Nota BeneVALIDATION LIST No. 57 (1996) (Ralstonia solanacearum)
VALIDATION LIST No. 57. Int. J. Syst. Bacteriol. (1996) 46:625-626.

Reference to PubMed documentYabuuchi E et al. (1992)
Yabuuchi, E., Kosako, Y., Oyaizu, H., Yano, I., Hotta, H., Hashimoto, Y., Ezaki, T., and Arakawa, M. "Proposal of Burkholderia gen. nov. and transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov." Microbiol. Immunol. (1992) 36:1251-1275. [Erratum: Microbiol. Immunol. (1993) 37:335.]

Reference to PubMed documentYabuuchi E et al. (1995)
Yabuuchi, E., Kosako, Y., Yano, I., Hotta, H., and Nishiuchi, Y. "Transfer of two Burkholderia and an Alcaligenes species to Ralstonia gen. Nov.: Proposal of Ralstonia pickettii (Ralston, Palleroni and Doudoroff 1973) comb. Nov., Ralstonia solanacearum (Smith 1896) comb. Nov. and Ralstonia eutropha (Davis 1969) comb. Nov." Microbiol. Immunol. (1995) 39:897-904.

Young JM et al. (1996) (reference with type strain information)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]


External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ralstonia solanacearum meta-databases BacDive
4 records from this provider organism-specific BioCyc
Ralstonia solanacearum (Smith 1896) Yabuuchi et al. 1996 taxonomy/phylogenetic Encyclopedia of life
43 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Ralstonia solanacearum culture/stock collections Global Catalogue of Microorganisms
29 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
3 records from provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Notes:
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