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Taxonomy browser (Flavonifractor plautii)

Flavonifractor plautii

Taxonomy ID: 292800 (for references in articles please use NCBI:txid292800)
Scientific name: Flavonifractor plautii (Seguin 1928) Carlier et al. 2010
type strain of Flavonifractor plautii: ATCC:29863
type strain of Flavonifractor plautii: CCUG:28093
type strain of Flavonifractor plautii: DSM:4000
type strain of Flavonifractor plautii: personal::Prevot S1
homotypic synonym: Fusobacterium plautii corrig. Seguin 1928 (Approved Lists 1980), nom. approb. 1)
homotypic synonym: Eubacterium plautii (Seguin 1928) Hofstad and Aasjord 1982
includes: Pseudoflavonifractor sp. YL31
NCBI BLAST® name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym: "Bacillus plauti" (sic) Seguin 1928, effective name 2)
heterotypic synonym: "Fusocillus plauti" (sic) (Seguin 1928) Prevot 1938, effective name 2)
heterotypic synonym: "Zuberella plauti" (sic) (Seguin 1928) Sebald 1962, effective name 2)
heterotypic synonym: Clostridium orbiscindens Winter et al. 1991
  type strain of Clostridium orbiscindens: ATCC:49531
type strain of Clostridium orbiscindens: DSM:6740
type strain of Clostridium orbiscindens: DSM:6749
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Flavonifractor
   Entrez records   
Database name Subtree links Direct links
Nucleotide 3,109 1,836
Protein 61,912 48,468
Genome 1 1
Popset 7 7
PubMed Central 160 160
Gene 3,755 3,755
SRA Experiments 24 18
Protein Clusters 2,388 2,388
Identical Protein Groups 28,116 25,343
Bio Project 11 8
Bio Sample 23 20
Bio Systems 169 169
Assembly 11 8
PubChem BioAssay 4 4
Taxonomy 5 1

Notes:

Comments and References:

Reference to PubMed documentCarlier JP et al. (2010)
Carlier, J.-P., Bedora-Faure, M., K'ouas, G., Alauzet, C., and Mory, F. "Proposal to unify Clostridium orbiscindens Winter et al. 1991 and Eubacterium plautii (Seguin 1928) Hofstad and Aasjord 1982, with description of Flavonifractor plautii gen. nov., comb. nov., and reassignment of Bacteroides capillosus to Pseudoflavonifractor capillosus gen. nov., comb. nov." Int. J. Syst. Evol. Microbiol. (2010) 60:585-590.

Prevot AR (1938)
Prevot, A.R. "Etudes de systematique bacterienne." Ann. Inst. Pasteur (Paris) (1938) 60:285-307. [No PubMed record available.]

Sebald M (1962)
Sebald, M. "Etude sur les bacteries anaerobies gram-negatives asporulees." Theses de l'Universite Paris, Imprimerie Barneoud S.A. Laval, France (1962). pp. 1-171. [No PubMed record available.]

Seguin P (1928)
Seguin, P. "Culture du Fusobacterium plauti forme mobile du bacille fusiforme." Comptes Rendus des Seances de la Societe de Biologie (Paris) (1928) 99:439-442. [No PubMed record available.]

Nota BeneSkerman VBD et al. (1980) (Fusobacterium plautii)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Nota BeneHofstad T & Aasjord P (1982)
Hofstad, T., and Aasjord, P. "Eubacterium plautii (Seguin 1928) comb. nov." Int. J. Syst. Bacteriol. (1982) 32:346-349. [No PubMed record available.]

Reference to PubMed documentWinter J et al. (1991)
Winter, J., Popoff, M.R., Grimont, P., and Bokkenheuser, V.D. "Clostridium orbiscindens sp. nov., a human intestinal bacterium capable of cleaving the flavonoid C-ring." Int. J. Syst. Bacteriol. (1991) 41:355-357.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
454 WGS ALL
WUGSC - Washington University, Genome Sequencing Center
937,534 2,108 939,642
Totals per type
937,534 2,108 939,642

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Flavonifractor plautii meta-databases BacDive
Flavonifractor plautii YL31 organism-specific BioCyc
Eubacterium plautii (SA%A9guin 1928) Hofstad and Aasjord 1982 taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
2728369350: Flavonifractor plautii YL31 organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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