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Taxonomy browser (Phytophthora ramorum)

Phytophthora ramorum

Taxonomy ID: 164328 (for references in articles please use NCBI:txid164328)
Scientific name: Phytophthora ramorum
type material of Phytophthora ramorum: BBA:9/95
type material of Phytophthora ramorum: CBS:101553
type material of Phytophthora ramorum: WPC:P10103
type material of Phytophthora ramorum: CPHST:BL55G
includes: Phytophthora sp. ex Parrotia persica
Genbank common name: Sudden oak death agent
NCBI BLAST® name: oomycetes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym: ramorum blight
heterotypic synonym: sudden oak death
Lineage( full )
cellular organisms; Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora
   Entrez records   
Database name Direct links
Nucleotide 12,017
Protein 971
Genome 1
Popset 82
GEO Datasets 29
PubMed Central 459
Gene 71
SRA Experiments 200
Identical Protein Groups 307
Bio Project 24
Bio Sample 217
Assembly 26
Taxonomy 1

Genome Information

Go to NCBI genomic BLAST® page for Phytophthora ramorum
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
898,494 898,494
Totals per type
898,494 898,494

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
11 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Phytophthora ramorum culture/stock collections Global Catalogue of Microorganisms
Phytophthora ramorum Werres, De Cock & Man in 't Veld 2001 taxonomy/phylogenetic Index Fungorum
2507525008: Phytophthora ramorum Pr102, UCD Pr4 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Phytophthora ramorum taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
23 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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