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Taxonomy browser (Lactobacillus plantarum)

Lactobacillus plantarum

Taxonomy ID: 1590 (for references in articles please use NCBI:txid1590)
Scientific name: Lactobacillus plantarum (Orla-Jensen 1919) Bergey et al. 1923
type strain of Lactobacillus plantarum: ATCC:14917
type strain of Lactobacillus plantarum: CCUG:30503
type strain of Lactobacillus plantarum: CIP:103151
type strain of Lactobacillus plantarum: DSM:20174
type strain of Lactobacillus plantarum: IFO:15891
type strain of Lactobacillus plantarum: JCM:1149
type strain of Lactobacillus plantarum: BCCM/LMG:6907
type strain of Lactobacillus plantarum: NBRC:15891
type strain of Lactobacillus plantarum: NCIMB:11974
type strain of Lactobacillus plantarum: NRRL:B:4496
homotypic synonym: "Streptobacterium plantarum" Orla-Jensen 1919, effective name 1)
homotypic synonym: "Lactobacterium plantarum" (Orla-Jensen 1919) Krasil'nikov 1949, effective name 1)
includes: Lactobacillus sp. Lact08
includes: Lactobacillus sp. Lact09
includes: Lactobacillus sp. Lact14
includes: Lactobacillus sp. M6DWS
includes: Lactobacillus sp. S2
includes: Lactobacillus sp. S8
includes: Lactobacillus sp. Z12
includes: Weissella sp. Lact07
NCBI BLAST® name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym: "Lactobacillus plantari" (sic) (Orla-Jensen 1919) Bergey et al. 1923 (Approved Lists 1980), effective name, nom. approb. 1),2)
heterotypic synonym: "Lactobacillus arabinosus" Fred et al., effective name 1)
 
equivalent: Lactobacillus arizonae
heterotypic synonym: Lactobacillus arizonensis Swezey et al. 2000
  type strain of Lactobacillus arizonensis: NRRL:B:14768
type strain of Lactobacillus arizonensis: ATCC:BAA:171
type strain of Lactobacillus arizonensis: CCUG:45396
type strain of Lactobacillus arizonensis: CIP:106786
type strain of Lactobacillus arizonensis: DSM:13273
type strain of Lactobacillus arizonensis: JCM:11125
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
   Entrez records   
Database name Subtree links Direct links
Nucleotide 104,800 99,851
Protein 1,191,662 1,094,693
Structure 111 70
Genome 1 1
Popset 555 555
GEO Datasets 581 457
PubMed Central 4,888 4,888
Gene 20,678 1,138
SRA Experiments 290 219
Protein Clusters 3,057 3,057
Identical Protein Groups 155,303 146,897
Bio Project 364 300
Bio Sample 731 653
Bio Systems 1,262 182
Assembly 464 422
Probe 35 35
PubChem BioAssay 16 16
Taxonomy 29 1

Notes:

Comments and References:

Bergey DH et al. (1923)
Bergey, D.H., Harrison, F.C., Breed, R.S., Hammer B.W., and Huntoon, F.M. Bergey's Manual of Determinative Bacteriology, 1st ed. (1923) The Williams and Wilkins Co., Baltimore, pp. 1-442. [No PubMed record available.]

Reference to PubMed documentBringel F et al. (1996)
Bringel, F., Curk, M.C., and Hubert, J.C. "Characterization of lactobacilli by Southern-type hybridization with a Lactobacillus plantarum pyrDFE probe." Int. J. Syst. Bacteriol. (1996) 46:588-594.

Reference to PubMed documentFalsen E et al. (1999) (reference with type strain information)
Falsen, E., Pascual, C., Sjoden, B., Ohlen, M., and Collins, M.D. "Phenotypic and phylogenetic characterization of a novel Lactobacillus species from human sources: description of Lactobacillus iners sp. nov." Int. J. Syst. Bacteriol. (1999) 49:217-221.

Reference to PubMed documentKostinek M et al. (2005)
Kostinek, M., Pukall, R., Rooney, A.P., Schillinger, U., Hertel, C., Holzapfel, W.H., and Franz, C.M.A.P. "Lactobacillus arizonensis is a later heterotypic synonym of Lactobacillus plantarum." Int. J. Syst. Evol. Microbiol. (2005) 55:2485-2489. Published online 29 July 2005. doi:10.1099/ijs.0.63880-0

Krasil'nikov NA (1949)
Krasil'nikov, N.A.: Guide to the Bacteria and Actinomycetes [Opredelitelv Bakterii i Actinomicetov], (1949). Akad. Nauk SSSR, Moscow, pp. 1-830. [No PubMed record available.]

Orla-Jensen S (1919)
Orla-Jensen, S.: The lactic acid bacteria. Host & Son, Copenhagen (1919). pp. 1-118. [No PubMed record available.]

Nota BeneSkerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Reference to PubMed documentSwezey JL et al. (2000)
Swezey, J.L., Nakamura, L.K., Abbott, T.P., and Peterson, R.E. "Lactobacillus arizonensis sp. nov., isolated from jojoba meal." Int. J. Syst. Evol. Microbiol. (2000) 50:1803-1809.


External Information Resources (NCBI LinkOut)

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8 records from this provider organism-specific BioCyc
Lactobacillus arizonensis Swezey et al. 2000 taxonomy/phylogenetic Encyclopedia of life
103 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Lactobacillus plantarum culture/stock collections Global Catalogue of Microorganisms
82 records from this provider organism-specific Integrated Microbial Genomes
Wikipedia taxonomy/phylogenetic iPhylo
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