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Taxonomy browser (Clostridium botulinum)

Clostridium botulinum

Taxonomy ID: 1491 (for references in articles please use NCBI:txid1491)
Scientific name: Clostridium botulinum (van Ermengem 1896) Bergey et al. 1923
type strain of Clostridium botulinum: ATCC:25763
type strain of Clostridium botulinum: CIP:104310
type strain of Clostridium botulinum: CDC:KA:38
type strain of Clostridium botulinum: personal::ELTDK 103
type strain of Clostridium botulinum: VPI:1550
type strain of Clostridium botulinum: VTT:E:98821
homotypic synonym: "Bacillus botulinus" van Ermengem 1896, effective name 1)
homotypic synonym: "Botulobacillus botulinus" (van Ermengem 1896) Orla-Jensen 1909, effective name 1)
homotypic synonym: "Ermengemillus botulinus" (van Ermengem 1896) Heller 1922, effective name 1)
NCBI BLAST® name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym: "Pacinia putrifica" Trevisan 1889, effective name 1)
heterotypic synonym: "Bacillus putrificus" (Trevisan 1889) Bienstock 1899, effective name 1)
heterotypic synonym: Clostridium putrificum (Trevisan 1889) Reddish and Rettger 1922 (Approved Lists 1980), nom. approb. 2)
  type strain of Clostridium putrificum: ATCC:25784
type strain of Clostridium putrificum: BCRC:14514
type strain of Clostridium putrificum: CCUG:15942
type strain of Clostridium putrificum: CIP:60.54
type strain of Clostridium putrificum: DSM:1734
type strain of Clostridium putrificum: JCM:1410
type strain of Clostridium putrificum: NCIMB:10677
type strain of Clostridium putrificum: NCTC:13037
type strain of Clostridium putrificum: VPI:4440
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
   Entrez records   
Database name Subtree links Direct links
Nucleotide 68,121 53,836
Protein 689,632 493,826
Structure 205 176
Genome 1 1
Popset 41 39
Conserved Domains 2 2
GEO Datasets 331 316
PubMed Central 3,756 3,756
Gene 53,547 508
SRA Experiments 436 243
Protein Clusters 7,947 7,947
Identical Protein Groups 200,966 178,186
Bio Project 143 75
Bio Sample 1,051 805
Bio Systems 2,179 -
Assembly 259 185
Probe 43 41
PubChem BioAssay 181 145
Taxonomy 238 1

Notes:

Comments and References:

Bergey DH et al. (1923)
Bergey, D.H., Harrison, F.C., Breed, R.S., Hammer B.W., and Huntoon, F.M. Bergey's Manual of Determinative Bacteriology, 1st ed. (1923) The Williams and Wilkins Co., Baltimore, pp. 1-442. [No PubMed record available.]

Reference to PubMed documentCollins MD & East AK (2004)
Collins, M.D., and East, A.K. "Phylogeny and taxonomy of the food-borne pathogen Clostridium botulinum and its neurotoxins." J. Appl. Microbiol. (1998) 84:5-17.

Nota BeneJudicial Commission (1997)
Judicial Commission of the International Committee on Systematic Bacteriology. "VIIIth International Congress of Microbiology and Applied Bacteriology. Minutes of the meetings, 17 and 22August 1996, Jerusalem, Israel." Int. J. Syst. Bacteriol. (1997) 47:240-241. [No PubMed record available.]

Reference to PubMed documentJUDICIAL OPINION 69 (1999)
Judicial Commission of the International Committee on Systematic Bacteriology. "Rejection of Clostridium putrificum and conservation of Clostridium botulinum and Clostridium sporogenes-Opinion 69." Int. J. Syst. Bacteriol. (1999) 49:339.

Nota BeneOlsen I et al. (1995)
Olsen, I., Johnson, J.L., Moore, L.V.H., and Moore, W.E.C. "Rejection of Clostridium putrificum and conservation of Clostridium botulinum and Clostridium sporogenes. Request for an opinion." Int. J. Syst. Bacteriol. (1995) 45:414. [No PubMed record available.]

Orla-Jensen S (1909)
Orla-Jensen, S. "Die Hauptlinien des naturlichen Bakterien-systems." Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. II (1909) 22:97-98,305-346. [No PubMed record available.]

Skerman VBD et al. (1980) (Clostridium botulinum)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [See 'Approved Lists of Bacterial Names' LinkOut below.]

Skerman VBD et al. (1980) (Clostridium putrificum)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [See 'Approved Lists of Bacterial Names' LinkOut below.]

Trevisan V (1889)
Trevisan, V. I generie e le specie della Batteriacee. (1889) Zanaboni and Gabuzzi, Milan, pp. 1-35. [No PubMed record available.]


External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
4 records from this provider organism-specific BioCyc
Clostridium botulinum (van Ermengem 1896) Bergey et al. 1923 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
28 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Clostridium botulinum culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
125 records from this provider organism-specific Integrated Microbial Genomes
Pacinia putrifica taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Wikipedia taxonomy/phylogenetic iPhylo
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