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Taxonomy browser (Monodelphis domestica)

Monodelphis domestica

Taxonomy ID: 13616 (for references in articles please use NCBI:txid13616)
Scientific name: Monodelphis domestica
Genbank common name: gray short-tailed opossum
Inherited blast name: marsupials
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Lineage( abbreviated )
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
   Entrez records   
Database name Direct links
Nucleotide 79,019
Nucleotide EST 265
Protein 51,311
Structure 1
Genome 1
Popset 54
GEO Datasets 238
UniGene 662
PubMed Central 1,559
Gene 46,679
SRA Experiments 308
Protein Clusters 9
Identical Protein Groups 41,108
Bio Project 44
Bio Sample 294
Bio Systems 485
Assembly 3
Clone DB 645
Probe 180
PubChem BioAssay 9
Taxonomy 1

Genome Information

Go to NCBI genomic BLAST page for Monodelphis domestica
Genome view: 10 chromosomes
Names 1 2 3 4 5 6 7 8 X Y
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND OTHER PCR PRIMERWALK SHOTGUN TRANSPOSON WGS ALL
BI - Broad Insititute
- 44 - 6 59,707 5,952 41,637,487 41,703,196
NISC - NIH Intramural Sequencing Center
- - - - 1,011,485 - - 1,011,485
TIGR - The Institute for Genome Research
226 - - - - - - 226
WUGSC - Washington University, Genome Sequencing Center
1,821 - 458 4,791 240,616 - - 247,686
Totals per type
2,047 44 458 4,797 1,311,808 5,952 41,637,487 42,962,593

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Monodelphis domestica taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Monodelphis domestica taxonomy/phylogenetic Barcodes of Life
DigiMorph images Digital Morphology
Monodelphis domestica (Wagner, 1842) taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Monodelphis domestica (Wagner, 1842) taxonomy/phylogenetic Integrated Taxonomic Information System
Monodelphis domestica Wagner 1842 taxonomy/phylogenetic Mammal Species of the World
2 records from this provider taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Monodelphis domestica organism-specific WebScipio - eukaryotic gene identification
diArk: Monodelphis domestica organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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