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Taxonomy browser (Cavia porcellus)

Cavia porcellus

Taxonomy ID: 10141 (for references in articles please use NCBI:txid10141)
Scientific name: Cavia porcellus
homotypic synonym: Cavia aperea porcellus
Genbank common name: domestic guinea pig
Inherited blast name: rodents
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
synonym: Cavia cobaya
common name: guinea pig
Lineage( abbreviated )
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
   Entrez records   
Database name Direct links
Nucleotide 53,068
Nucleotide EST 19,975
Protein 38,976
Structure 30
Genome 1
Popset 48
GEO Datasets 418
PubMed Central 1,181
Gene 36,442
SRA Experiments 383
Protein Clusters 1
Identical Protein Groups 32,469
Bio Project 27
Bio Sample 390
Assembly 1
Probe 1,722
PubChem BioAssay 12,971
Taxonomy 1

Genome Information

Go to NCBI genomic BLAST page for Cavia porcellus
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND OTHER PCR PRIMERWALK SHOTGUN TRANSPOSON WGS ALL
BCCAGSC - British Columbia Cancer Agency Genome Sciences Centre
4,945 - - - - - - 4,945
BI - Broad Insititute
39,168 28 24 36 14,592 2,752 27,367,448 27,424,048
NISC - NIH Intramural Sequencing Center
- - - - 825,622 - - 825,622
Totals per type
44,113 28 24 36 840,214 2,752 27,367,448 28,254,615

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Cavia porcellus taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic AnimalBase
2 records from this provider taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Cavia porcellus taxonomy/phylogenetic Barcodes of Life
4 records from this provider supplemental materials Dryad Digital Repository
Cavia porcellus (Linnaeus, 1758) taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0006476 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Cavia porcellus (Linnaeus, 1758) taxonomy/phylogenetic Integrated Taxonomic Information System
Cavia porcellus Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Cavia porcellus taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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