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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 7 7 -
BioSample 8 8 -
Identical Protein Groups 8,870 8,870 -
Nucleotide 108 108 97
PMC 12 12 -
Protein 21,439 21,439 -
SRA 5 5 -
Taxonomy 1 1 -

Mycobacterium shigaense

Taxonomy ID: 722731 (for references in articles please use ncbitaxon:722731)
current name
Mycobacterium shigaense  Fukano et al. 2018 in [Fukano H et al. (2018)]
type strain of Mycobacterium shigaense: personal : UN-152 , JCM : 32072 , DSM : 46748
homotypic synonym:
"Mycobacterium shigaense"  Nakanaga et al. 2012 , effective name  1) in [Nakanaga K et al. (2012)]
includes:
Mycobacterium sp. UN-152
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium simiae complex

Notes:

Comments and References:

Nakanaga K et al. (2012) , Pubmed: abstract
Nakanaga, K., Hoshino, Y., Wakabayashi, M., Fujimoto, N., Tortoli, E., Makino, M., Tanaka, T., and Ishii, N. "Mycobacterium shigaense sp. nov., a novel slowly growing scotochromogenic mycobacterium that produced nodules in an erythroderma patient with severe cellular immunodeficiency and a history of Hodgkin's disease." J. Dermatol. (2012) 39(4):389-396.
Fukano H et al. (2018) , Pubmed: abstract
Fukano, H., Yoshida, M., Kazumi, Y., Fujiwara, N., Katayama, K., Ogura, Y., Hayashi, T., Miyamoto, Y., Fujimoto, N., Hongsheng, W., Mizumoto, C., Koizumi, Y., Maeda, H., Hiranuma, O., Mitarai, S., Ishii, N., and Hoshino, Y. "Mycobacterium shigaense sp. nov., a slow-growing, scotochromogenic species, is a member of the Mycobacterium simiae complex." Int. J. Syst. Evol. Microbiol. (2018) 68(8):2437-2442.
Yoshida M et al. (2018c)
Yoshida, M., Fukano, H., Ogura, Y., Kazumi, Y., Mitarai, S., Hayashi, T., and Hoshino, Y. "Complete genome sequence of Mycobacterium shigaense." Genome Announc. (2018) 6:e00552-18.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium shigaense type strain (BD-ID 24231) meta-databases BacDive
Mycobacterium shigaense JCM 32072 organism-specific BioCyc
Mycobacterium shigaense JCM 32072 organism-specific BioCyc
Mycobacterium shigaense JCM 32072 organism-specific BioCyc
GOLD: 2 Organisms organism-specific Genomes On Line Database
2775507225: Mycobacterium shigaense UN-152 organism-specific Integrated Microbial Genomes
8008987092: Mycobacterium shigaense UN-152 organism-specific Integrated Microbial Genomes
2913062581: Mycobacterium shigaense SCY organism-specific Integrated Microbial Genomes
Mycobacterium shigaense taxonomy/phylogenetic Lifemap
Mycobacterium shigaense | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Mycobacterium shigaense type strain (SI-ID 400471) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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