Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Mycobacterium shigaense)

Mycobacterium shigaense

Taxonomy ID: 722731 (for references in articles please use NCBI:txid722731)
current name
Mycobacterium shigaense Fukano et al. 2018 in [Fukano H et al. (2018)]
type strain of Mycobacterium shigaense: personal::UN-152, JCM:32072, DSM:46748
homotypic synonym:
"Mycobacterium shigaense" Nakanaga et al. 2012, effective name 1) in [Nakanaga K et al. (2012)]
includes:
Mycobacterium sp. UN-152
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium simiae complex
   Entrez records   
Database name Direct links Links from type
Nucleotide 108 97
Protein 21,546 -
PubMed Central 12 -
SRA Experiments 5 -
Identical Protein Groups 8,826 -
BioProject 7 -
BioSample 8 1
Datasets Genome 5 -
Taxonomy 1 -

Notes:

Comments and References:

Fukano H et al. (2018), PubMed: abstract
Fukano, H., Yoshida, M., Kazumi, Y., Fujiwara, N., Katayama, K., Ogura, Y., Hayashi, T., Miyamoto, Y., Fujimoto, N., Hongsheng, W., Mizumoto, C., Koizumi, Y., Maeda, H., Hiranuma, O., Mitarai, S., Ishii, N., and Hoshino, Y. "Mycobacterium shigaense sp. nov., a slow-growing, scotochromogenic species, is a member of the Mycobacterium simiae complex." Int. J. Syst. Evol. Microbiol. (2018) 68(8):2437-2442.
Nakanaga K et al. (2012), PubMed: abstract
Nakanaga, K., Hoshino, Y., Wakabayashi, M., Fujimoto, N., Tortoli, E., Makino, M., Tanaka, T., and Ishii, N. "Mycobacterium shigaense sp. nov., a novel slowly growing scotochromogenic mycobacterium that produced nodules in an erythroderma patient with severe cellular immunodeficiency and a history of Hodgkin's disease." J. Dermatol. (2012) 39(4):389-396.
Yoshida M et al. (2018c)
Yoshida, M., Fukano, H., Ogura, Y., Kazumi, Y., Mitarai, S., Hayashi, T., and Hoshino, Y. "Complete genome sequence of Mycobacterium shigaense." Genome Announc. (2018) 6:e00552-18.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium shigaense meta-databases BacDive - Free access to bacterial information database
4 records from this provider organism-specific BioCyc
GOLD: 2 Organisms organism-specific Genomes On Line Database
3 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium shigaense taxonomy/phylogenetic Lifemap
Mycobacterium shigaense | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers



Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]