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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 10 10 -
BioSample 92 92 -
Conserved Domains 2 2 -
GEO DataSets 13 13 -
Gene 2,565 2,565 -
Identical Protein Groups 3,739 3,739 -
Nucleotide 141 141 45
PMC 29 29 -
Protein 7,835 7,835 -
SRA 156 156 -
Structure 179 179 -
Taxonomy 1 1 -

Thermococcus kodakarensis KOD1

Taxonomy ID: 69014 (for references in articles please use ncbitaxon:69014)
current name
Thermococcus kodakarensis KOD1
equivalent:
Thermococcus kodakarensis strain KOD1
NCBI BLAST name: euryarchaeotes
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Pyrococcus sp. KOD1
heterotypic synonym Pyrococcus sp. (strain KOD1)
heterotypic synonym Thermococcus kodakaraensis KOD1
Lineage(full)
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Atomi H et al. (2004)
Atomi,H., Fukui, T., Kanai, T., Morikawa, M., and Imanaka, T. "Description of Thermococcus kodakaraensis sp. nov., a well studied hyperthermophilic archaeon previously reported as Pyrococcus sp. KOD1" Archaea (2004) 1:263-267. Published online 16 April 2004
Fujiwara S et al. (1998)
Fujiwara, S., Takagi, M., and Imanaka, T. "Archaeon Pyrococcus kodakaraensis KOD1: application and evolution." Biotechnol. Annu. Rev. (1998) 4:259-284.
Fukui T et al. (unpublished_2005)
Fukui, T., Kanai, T., Atomi, H., Fujiwara, S., and Imanaka, T. "Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Unpublished (as of 1 February 2005)
Morikawa M et al. (1994)
Morikawa, M., Izawa, Y., Rashid, N., Hoaki, T., and Imanaka, T. "Purification and characterization of a thermostable thiol protease from a newly isolated hyperthermophilic Pyrococcus sp." Appl. Environ. Microbiol. (1994) 60(12):4559-4566.
Tang XF et al. (2000)
Tang, X.F., Ezaki, S., Atomi, H., and Imanaka, T. "Biochemical analysis of a thermostable tryptophan synthase from a hyperthermophilic archaeon." Eur. J. Biochem. (2000) 267(21):6369-6377.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Thermococcus kodakarensis type strain (BD-ID 161223) meta-databases BacDive
GOLD: Go0000507 organism-specific Genomes On Line Database
638154520: Thermococcus kodakarensis KOD1 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Thermococcus kodakarensis type strain (SI-ID 139018) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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