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| Entrez | PubMed | Nucleotide | Protein | Genome | Structure | PMC | Taxonomy | BioCollections |
| Entrez records | |||
| Database name | Direct links | Subtree links | Links from type |
| BioProject | 101 | 101 | - |
| BioSample | 65 | 65 | - |
| Conserved Domains | 1 | 1 | - |
| GEO DataSets | 2,134 | 2,134 | - |
| Gene | 3,232 | 3,232 | - |
| Identical Protein Groups | 3,249 | 3,249 | - |
| Nucleotide | 306 | 306 | - |
| Protein | 8,621 | 8,621 | - |
| SRA | 62 | 62 | - |
| Structure | 81 | 81 | - |
| Taxonomy | 1 | 1 | - |
|
genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
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DasSarma P & DasSarma S (2008) DasSarma, P., and DasSarma, S. "On the origin of prokaryotic 'species': the taxonomy of halophilic Archaea." Saline Systems (2008) 4:5. |
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Gruber C et al. (2004) Gruber, C., Legat, A., Pfaffenhuemer, M., Radax, C., Weidler, G., Busse, H.-J., and Stan-Lotter, H. "Halobacterium noricense sp. nov., an archaeal isolate from a bore core of an alpine Permian salt deposit, classification of Halobacterium sp. NRC-1 as a strain of H. salinarum and emended description of H. salinarum." Extremophiles (2004) 8:431-439. Published online 30 July 2004. DOI: 10.1007/s00792-004-0403-6 |
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Ng WV et al. (2000) Ng, W.V., Kennedy, S.P., Mahairas, G.G., Berquist, B., Pan, M., Shukla, H.D., Lasky, S.R., Baliga, N.S., Thorsson, V., Sbrogna, J., Swartzell, S., Weir, D., Hall, J., Dahl, T.A., Welti, R., Goo, Y.A., Leithauser, B., Keller, K., Cruz, R., Danson, M.J., Hough, D.W., Maddocks, D.G., Jablonski, P.E., Krebs, M.P., Angevine, C.M., Dale, H., Isenbarger, T.A., Peck, R.F., Pohlschroder, M., Spudich, J.L., Jung, K.W., Alam, M., Freitas, T., Hou, S., Daniels, C.J., Dennis, P.P., Omer, A.D., Ebhardt, H., Lowe, T.M., Liang, P., Riley, M., Hood, L., and DasSarma, S. "Genome sequence of Halobacterium species NRC-1." Proc. Natl. Acad. Sci. U S A (2000) 97:12176-12181. |
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Pfeiffer F & Dyall-Smith M (2023) Pfeiffer, F., and Dyall-Smith, M. "Genome comparison reveals that Halobacterium salinarum 63-R2 is the origin of the twin laboratory strains NRC-1 and R1." MicrobiologyOpen (2023) 12(3):e1365. |
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Pfeiffer F et al. (2008) Pfeiffer, F., Schuster, S.C., Broicher, A., Falb, M., Palm, P., Rodewald, K., Ruepp, A., Soppa, J., Tittor, J., and Oesterhelt, D. "Evolution in the laboratory: The genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1." Genomics (2008) 91:335-346. |
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Pfeiffer F et al. (2019) Pfeiffer, F., Marchfelder, A., Habermann, B., and Dyall-Smith, M.L. "The genome sequence of the Halobacterium salinarum type strain is closely related to that of laboratory strains NRC-1 and R1." Microbiol. Resour. Announc. (2019) 8:e00429-19. |
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Pfeiffer F et al. (2020) Pfeiffer, F., Losensky, G., Marchfelder, A., Habermann, B., and Dyall-Smith, M. "Whole-genome comparison between the type strain of Halobacterium salinarum (DSM 3754(T) ) and the laboratory strains R1 and NRC-1." MicrobiologyOpen (2020) 9(2):e974. |
| LinkOut | Subject | LinkOut Provider |
| Halobacterium salinarum type strain (BD-ID 5912) | meta-databases | BacDive |
| Halobacterium salinarum NRC-1; ATCC 700922 | organism-specific | BioCyc |
| Halobacterium salinarum NRC-1; ATCC 700922 | organism-specific | BioCyc |
| Halobacterium salinarum NRC-1; ATCC 700922 | organism-specific | BioCyc |
| GOLD: Go0000749 | organism-specific | Genomes On Line Database |
| 638154504: Halobacterium salinarum NRC-1 | organism-specific | Integrated Microbial Genomes |
| OMA | taxonomy/phylogenetic | OMA Browser: Orthologous MAtrix |
| Halobacterium salinarum type strain (SI-ID 40374) | meta-databases | StrainInfo, Leibniz Institute DSMZ |
| Halobacterium salinarum type strain (SI-ID 40375) | meta-databases | StrainInfo, Leibniz Institute DSMZ |
| Halobacterium salinarum type strain (SI-ID 71407) | meta-databases | StrainInfo, Leibniz Institute DSMZ |
Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.
Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.
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