Taxonomy browser (Erwinia rhapontici)

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Taxonomy browser (Erwinia rhapontici)

Erwinia rhapontici

Taxonomy ID: 55212 (for references in articles please use NCBI:txid55212)

current name

Erwinia rhapontici (Millard 1924) Burkholder 1948 (Approved Lists 1980) emend. Hauben et al. 1998

type strain of Erwinia rhapontici: ATCC :29283, CFBP:3163, CIP:105202, DSM :4484, ICMP :1582, BCCM/LMG :2688, NCPPB:1578

homotypic synonym:

"Pseudobacterium rhapontici" (Millard 1924) Krasil'nikov 1949, effective name¹⁾

"Erwinia carotovora var. rhapontici" (Millard 1924) Dye 1969, effective name²⁾

Pectobacterium rhapontici (Millard 1924) Patel and Kulkarni 1951 (Approved Lists 1980), nom. approb.³⁾

NCBI BLAST name: enterobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Bacterium rhaponticum" (sic) Millard 1924, effective name⁴⁾

heterotypic synonym

"Phytomonas rhapontica" (sic) Millard 1924, effective name⁵⁾

heterotypic synonym

"Aplanobacter rhaponticum" (sic) (Millard 1924) White 1936, effective name⁶⁾

heterotypic synonym

"Xanthomonas rhapontica" (sic) (Millard 1924) Savulescu 1947, effective name⁷⁾

Lineage( full ): cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Erwinia

Entrez records
Database name	Direct links	Links from type
Nucleotide	456	22
Protein	36,534	-
Structure	5	-
Genome	1	-
Popset	38	-
PubMed Central	98	-
Gene	1	-
SRA Experiments	10	-
Identical Protein Groups	18,698	-
BioProject	9	-
BioSample	14	2
Assembly	9	-
Taxonomy	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
6) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
7) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Associate Editor IJSB (1999) (Erwinia)

Associate Editor, IJSB: Validation List no. 68 (footnote //). Int. J. Syst. Bacteriol. (1999) 49:1-3.

Burkholder WH (1948c)

Burkholder, W.H. "Genus I. Erwinia Winslow et al." In: Breed, Murray, and Smith (Editors), Bergey's Manual of Determinative Bacteriology, 6th ed. (1948). The Williams and Wilkins Co., Baltimore, pp. 463-478. [No PubMed record available.]

Dye DW (1969c)

Dye, D.W. "A taxonomic study of the genus Erwinia. II. The 'carotovora' group. N.Z. J. Sci. (1969) 12: 81-97.

Hauben L et al. (1998)

Hauben, L., Moore, E.R.B., Vauterin, L., Steenackers, M., Mergaert, J., Verdonck, L., and Swings, J. "Phylogenetic position of phytopathogens within the Enterobacteriaceae." Syst. Appl. Microbiol. (1998) 21:384-397.

Krasil'nikov NA (1949)

Krasil'nikov, N.A.: Guide to the Bacteria and Actinomycetes [Opredelitelv Bakterii i Actinomicetov], (1949). Akad. Nauk SSSR, Moscow, pp. 1-830. [No PubMed record available.]

Millard WA (1924)

Millard, W.A. "Crown rot of rhubarb." Yorks. Council Agr. Ed. Bull. (1924) 134:1-28.

Patel MK & Kulkarni YS (1951)

Patel, M.K., and Kulkarni. Y.S. "Nomenclature of bacterial plant pathogens." Indian Phytopathol. (1951) 4:74-84. [No PubMed record available.]

Skerman VBD et al. (1980) (Erwinia rhapontici)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.

Skerman VBD et al. (1980) (Pectobacterium rhapontici)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.

Savulescu T (1947)

Savulescu, T. "Contribution a la classification des bacteriacees phytopathogenes." Anal. Acad. Romane Ser. III Tom 22, Memoire (1947) 4:1-26. [No PubMed record available.]

White HL (1936)

White, H.L. "Diseases of early vegetables." Rep. Exp. Sta. Cheshunt (1936) 1935:42-43.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Erwinia rhapontici	meta-databases	BacDive
Erwinia rhapontici (Millard 1924) Burkholder 1948 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 6 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Erwinia rhapontici	culture/stock collections	Global Catalogue of Microorganisms
3 records from this provider	organism-specific	Integrated Microbial Genomes
Erwinia rhapontici \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Erwinia rhapontici	taxonomy/phylogenetic	Systematic Mycology and Microbiology Laboratory, Fungal Databases

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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