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Taxonomy browser (Coffea canephora)

Coffea canephora

Taxonomy ID: 49390 (for references in articles please use NCBI:txid49390)
current name
Coffea canephora Pierre ex A.Froehner, 1897
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Coffea canephora var. robusta (L.Linden) A.Chev.
heterotypic synonym
Coffea robusta L.Linden
common name(s) robusta coffee
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
   Entrez records   
Database name Subtree links Direct links
Nucleotide 226,599 226,564
Protein 27,059 27,059
Structure 6 6
Genome 1 1
Popset 51 51
GEO Datasets 17 17
PubMed Central 1,249 1,249
Gene 133 133
SRA Experiments 929 929
Identical Protein Groups 26,100 26,100
BioProject 35 35
BioSample 693 693
Assembly 2 2
Taxonomy 2 1

Comments and References:

image:Coffea canephora
GRIN taxonomy
Name verified on date of entry into database in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.
TROPICOS (Mar 20, 2012)
Name verified on 20 Mar 2012 in: Tropicos.org. Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at: http://www.tropicos.org/
World Checklist of Rubiaceae (Mar 13, 2017)
Name accessed on 13 March 2017 in: Govaerts, R., Ruhsam, M., Andersson, L., Robbrecht, E., Bridson, D., Davis, A., Schanzer, I. & Sonke, B. World Checklist of Rubiaceae. The Board of Trustees of the Royal Botanic Gardens, Kew. Published on the Internet; http://www.kew.org/wcsp/rubiaceae/

Genome Information

Go to NCBI genomic BLAST page for Coffea canephora
Genome view: 11 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Coffea canephora Pierre ex A. Froehner taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Coffea canephora Pierre ex Froehner taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Coffea canephora taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Coffea canephora (Pierre ex A.Froehner) herbarium/museum collections PlantaeDB, University of Bucharest
2 records from this provider taxonomy/phylogenetic Plants of the World Online
2 records from this provider taxonomy/phylogenetic The International Plant Names Index
2 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Coffea canephora organism-specific WebScipio - eukaryotic gene identification
diArk: Coffea canephora organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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