Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
Taxonomy browser (Oryza sativa f. spontanea)

Oryza sativa f. spontanea

Taxonomy ID: 4536 (for references in articles please use NCBI:txid4536)
current name
Oryza sativa f. spontanea Roshev. nom. illeg., nom. illeg. 1)
NCBI BLAST name: monocots
Rank: forma
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Oryza nivara S.D.Sharma & Shastry
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
   Entrez records   
Database name Direct links
Nucleotide 112,865
Protein 2,945
Genome 1
Popset 599
GEO Datasets 42
PubMed Central 161
Gene 166
SRA Experiments 65
Protein Clusters 97
Identical Protein Groups 889
Bio Project 13
Bio Sample 73
Assembly 4
Probe 101
Taxonomy 1


Comments and References:

TROPICOS (Aug 27, 2015)
Name accessed on 27 August 2015 in: Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at:
Zheng XM & Ge S 2010
Zheng XM and Ge S. 2010. Ecological divergence in the presence of gene flow in two closely related Oryza species (Oryza rufipogon and O. nivara). Molecular Ecology 19(12): 2439-2454.
GRIN (Oct 18, 2016)
Name accessed on 18 October 2016 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Genome Information

Go to NCBI genomic BLAST page for Oryza sativa f. spontanea

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
3 records from this provider supplemental materials Dryad Digital Repository
GOLD: Go0093724 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Oryza nivara taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Oryza nivara taxonomy/phylogenetic Plants of the World Online
Oryza nivara taxonomy/phylogenetic The International Plant Names Index
2 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
WebScipio: Oryza nivara organism-specific WebScipio - eukaryotic gene identification
diArk: Oryza nivara organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Comments and questions to

[Help] [Search] [NLM NIH] [Disclaimer]