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Taxonomy browser (Crocosphaera subtropica ATCC 51142)

Crocosphaera subtropica ATCC 51142

Taxonomy ID: 43989 (for references in articles please use NCBI:txid43989)
current name
Crocosphaera subtropica ATCC 51142
includes:
Cyanothece sp. ATCC 51142
NCBI BLAST name: cyanobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Cyanothece sp. BH68
heterotypic synonym
Cyanothece sp. BH68K
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Cyanobacteria/Melainabacteria group; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanothecaceae; Crocosphaera; Crocosphaera subtropica
   Entrez records   
Database name Direct links Links from type
Nucleotide 126 25
Protein 10,503 -
Structure 17 -
Genome 1 -
GEO Datasets 73 -
Gene 5,368 -
SRA Experiments 3 -
Protein Clusters 9 -
Identical Protein Groups 6,508 -
Bio Project 5 -
Bio Sample 32 2
Bio Systems 195 -
Assembly 1 1
Taxonomy 1 -

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Mareš J et al. (2019)
Mareš, J., Johansen, J.R., Hauer, T., Zima, J. Jr., Ventura, S., Cuzman, O., Tiribilli ,B., and Kaštovský, J. "Taxonomic resolution of the genus Cyanothece (Chroococcales, Cyanobacteria), with a treatment on Gloeothece and three new genera, Crocosphaera, Rippkaea, and Zehria." J. Phycol. (2019) 55:578-610.
Gao F & Zhang CT (2008)
Gao, F., and Zhang, C.-T. "Origins of replication in Cyanothece 51142."
Proc. Natl. Acad. Sci. USA (2008) 105:E125; doi:10.1073/pnas.0809987106
Reddy KJ et al. (1993)
Reddy, K.J., Haskell, J.B., Sherman, D.M., and Sherman, L.A. "Unicellular, aerobic nitrogen-fixing cyanobacteria of the genus Cyanothece." J. Bacteriol. (1993) 175:1284-1292.
Welsh EA et al. (2008)
Welsh, E.A., Liberton, M., Stockel, J., Loh, T., Elvitigala, T., Wang, C., Wollam, A., Fulton, R.S., Clifton, S.W., Jacobs, J.M., Aurora, R., Ghosh, B.K., Sherman, L.A., Smith, R.D., Wilson, R.K., and Pakrasi, H.B. "The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle." Proc. Natl. Acad. Sci. USA (2008) 105:15094-15099.
Welsh EA et al. (2008b)
Welsh, E.A., Liberton, M., Stockel, J., and Pakrasi, H.B. "Reply to Zhang et al.: Identification of origins of replication in the Cyanothece 51142 genome." Proc. Natl. Acad. Sci. USA (2008) 105:E126-E127; doi:10.1073/pnas.0810681106

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Cyanothece sp. ATCC 51142 ATCC 51142 organism-specific BioCyc
2 records from this provider organism-specific Genomes On Line Database
641522622: Crocosphaera subtropica BH68 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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