Taxonomy browser (Prescottella equi)

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Taxonomy browser (Prescottella equi)

Prescottella equi

Taxonomy ID: 43767 (for references in articles please use NCBI:txid43767)

current name

Prescottella equi (Magnusson 1923) Sangal et al. 2022 in [Sangal V et al. (2022)]

basionym:

Corynebacterium equi Magnusson 1923 (Approved Lists 1980), nom. approb.¹⁾ in [Skerman VBD et al. (1980)]

type strain of Corynebacterium equi: ATCC :25729, ATCC :6939, CCUG :892, CIP:54.72, DSM :20307, HAMBI:2061, IFO :14956, NBRC :14956, JCM :1311, JCM :3209, BCCM/LMG :18452, NBRC :101255, NCTC :1621, NRRL :B-16538, VKM:Ac:953

homotypic synonym:

"Mycobacterium equi" (Magnusson 1923) Jensen 1934, effective name²⁾

"Prescottella equi" (Magnusson 1923) Jones et al. 2013, effective name³⁾ in [Jones AL et al. (2013b)]

"Prescottia equi" (Magnusson 1923) Jones et al. 2013, effective name, nom. illeg.^4),5) in [Jones AL et al. (2013)]

Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

homotypic synonym:

Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 emend. Nouioui et al. 2018, emended name in [Nouioui I et al. (2018c)]

Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1979 (sic)

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Corynebacterium (pyogenes) equi roseum" Lutje 1923, effective name⁶⁾

heterotypic synonym

"Corynebacterium pyogenes (equi)" Miessner and Wetzel 1923

heterotypic synonym

"Corynebacterium magnusson-holth" Plum 1940, effective name⁷⁾

heterotypic synonym

"Corynebacterium purulentus" (sic) Holtman 1945, effective name⁸⁾

heterotypic synonym

"Mycobacterium restrictum" (Turfitt 1944) Krasil'nikov 1949, effective name⁹⁾

heterotypic synonym

Nocardia restricta (Turfitt 1944) McClung 1974 (Approved Lists 1980) in [Skerman VBD et al. (1980)]

basionym:

"Proactinomyces restrictus" Turfitt 1944, effective name¹⁰⁾

type strain of "Proactinomyces restrictus": CCUG :17758, DSM :43199, JCM :3223, BCCM/LMG :7335, ATCC :14887

heterotypic synonym

Rhodococcus hoagii (Morse 1912) Kämpfer et al. 2014, nom. rej.¹¹⁾ in [Kämpfer P et al. (2014c)]

homotypic synonym:

Rhodococcus hoagii (Morse 1912) Kämpfer et al. 2014 emend. Nouioui et al. 2018, nom. rej., emended name in [Nouioui I et al. (2018c)]

basionym:

Corynebacterium hoagii (Morse 1912) Eberson 1918 (Approved Lists 1980), nom. rej.¹²⁾ in [Skerman VBD et al. (1980)]

type strain of Corynebacterium hoagii: ATCC :7005, CCUG :20991, CIP:81.17, DSM :20295, JCM :1319, NBRC :103062, NCTC :10673

homotypic synonym:

"Bacillus hoagii" Morse 1912, effective name¹³⁾

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae; Prescottella

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	8,314	7,589	300
Protein	320,356	305,936	-
Structure	8	2	-
Genome	1	1	-
Popset	67	67	-
Conserved Domains	1	1	-
PubMed Central	118	114	-
Gene	19,832	5,578	-
SRA Experiments	35	29	-
Protein Clusters	2,944	2,944	-
Identical Protein Groups	162,357	160,721	-
BioProject	47	42	-
BioSample	377	371	10
Assembly	271	264	4
PubChem BioAssay	61	61	-
Taxonomy	4	1	-

Notes:

1) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) 'Nom. illeg.' (= nomen illegitimum, = illegitimate name) refers to a validly published name that is not in accordance with the particular rules of its relevant Code of Nomenclature.
6) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
7) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
8) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
9) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
10) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
11) 'Nom. rej.' (= nomen rejeciendum, = rejected name) refers to a name rejected in favor of a name conserved through procedures stipulated in the various Codes of Nomenclature.
12) 'Nom. rej.' (= nomen rejeciendum, = rejected name) refers to a name rejected in favor of a name conserved through procedures stipulated in the various Codes of Nomenclature.
13) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Sangal V et al. (2022), PubMed: abstract

Sangal, V., Goodfellow, M., Jones, A.L., and Sutcliffe, I.C. "A stable home for an equine pathogen: valid publication of the binomial Prescottella equi gen. nov., comb. nov., and reclassification of four rhodococcal species into the genus Prescottella." Int. J. Syst. Evol. Microbiol. (2022) 72(9):005551.

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.

Jones AL et al. (2013b), PubMed: abstract

Jones, A.L., Sutcliffe, I.C., and Goodfellow, M. "Proposal to replace the illegitimate genus name Prescottia Jones et al. 2013 with the genus name Prescottella gen. nov. and to replace the illegitimate combination Prescottia equi Jones et al. 2013 with Prescottella equi comb. nov." Antonie van Leeuwenhoek (2013) 103(6):1405-1407.

Jones AL et al. (2013), PubMed: abstract

Jones, A.L., Sutcliffe, I.C., and Goodfellow, M. "Prescottia equi gen. nov., comb. nov.: a new home for an old pathogen." Antonie van Leeuwenhoek (2013) 103(3):655-671.

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

Kämpfer P et al. (2014c), PubMed: abstract

Kämpfer, P., Dott, W., Martin, K., and Glaeser, S.P. "Rhodococcus defluvii sp. nov., isolated from wastewater of a bioreactor and formal proposal to reclassify [Corynebacterium hoagii] and Rhodococcus equi as Rhodococcus hoagii comb. nov." Int. J. Syst. Evol. Microbiol. (2014) 64(3):755-761.

Collins MD & Cummins CS (1986)

Collins, M.D., and Cummins, C.S. "Genus Corynebacterium Lehmann and Neumann 1896, 350AL." In: P.H.A. Sneath, N.S. Mair, M.E. Sharpe. and J.G. Holt (ed.) Bergey's Manual of Systematic Bacteriology, vol. 2, The Williams & Wilkins Co., Baltimore (1986) pp. 1266-1276.

Euzeby JP (1997) (Rhodococcus equi)

Euzeby, J.P. "Corrigenda to the Approved Lists of Bacterial Names and to the amended edition of the Approved Lists of Bacterial Names." Int. J. Syst. Bacteriol. (1997) 47(4):1271-1272. [No PubMed record available.]

Fernandez-Garayzabal JF et al. (1996)

Fernandez-Garayzabal, J.F., Suarez, G., Blanco, M.M., Gibello, A., and Dominguez, L. "Taxonomic note: a proposal for reviewing the interpretation of the CAMP reaction between Listeria monocytogenes and Rhodococcus equi." Int. J. Syst. Bacteriol. (1996) 46(3):832-834.

Garrity GM (2014), doi:10.1099/ijs.0.059741-0

Garrity, G.M. "Conservation of Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 and rejection of Corynebacterium hoagii (Morse 1912) Eberson 1918." Int. J. Syst. Evol. Microbiol. (2014) 64(1):311-312.

Hill LR et al. (1984) (reference relating to orthographic revision)

Hill, L.R., Skerman, V.B.D., and Sneath, P.H.A. "Corrigenda to the Approved Lists of Bacterial Names edited for the International Committee on Systematic Bacteriology." Int. J. Syst. Bacteriol. (1984) 34(4):508-511. [No PubMed record available.]

JUDICIAL OPINION 106 (2022), doi:10.1099/ijsem.0.005197

JUDICIAL OPINION 106 (2022). In: Arahal, D.R., Busse, H.-J., Bull, C.T., Christensen, H., Chuvochina, M., Dedysh, S.N., Fournier, P.-E., Konstantinidis, K.T., Parker, C.T., Rosselló-Móra, R., Ventosa, A., and Göker, M. "Judicial Opinions 103-111." Int. J. Syst. Evol. Microbiol. (2022) 72(1):005197. [N.B.: the epithet "hoagii" in the taxonomic names 'Rhodococcus hoagii' and 'Corynebacterium hoagii' is placed on the list of 'epitheta specifica et subspecifica rejicienda'.]

Sly LI et al. (1983)

Sly, L.I., Mutimer, M.D., and Woolcock, J.B. "Confusing irregularities in the nomenclature of some Rhodococcus species." Int. J. Syst. Bacteriol. (1983) 33(3):658-659. [No PubMed record available.]

Vázquez-Boland JA & Meijer WG (2019)

Vázquez-Boland, J.A., and Meijer, W.G. "The pathogenic actinobacterium Rhodococcus equi: what's in a name?" Mol. Microbiol. (2019) 112(1):1-15.

Morse ME (1912)

Morse, M.E. "A study of the diphtheria group of organisms by the biometrical method." J. Infect. Dis. (1912) 11:253-285. [No PubMed record available.]

Rainey FA et al. (1995b)

Rainey, F.A., Burghardt, J., Kroppenstedt, R., Klatte, S., and Stackebrandt, E. "Polyphasic evidence for the transfer of Rhodococcus roseus to Rhodococcus rhodochrous." Int. J. Syst. Bacteriol. (1995) 45(1):101-103. [No PubMed record available.]

Vázquez-Boland JA et al. (2020), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7395624/

Vázquez-Boland, J.A., Scortti, M., and Meijer, W.G. "Conservation of Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 and rejection of Rhodococcus hoagii (Morse 1912) Kämpfer et al. 2014." Int. J. Syst. Evol. Microbiol. (2020) 70(5):3572-3576.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Corynebacterium hoagii	meta-databases	BacDive
Corynebacterium equi Magnusson 1923 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
2 records from this provider	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Rhodococcus equi	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
Proactinomyces restrictus Turfitt 1944	taxonomy/phylogenetic	Index Fungorum
45 records from this provider	organism-specific	Integrated Microbial Genomes
2 records from this provider	taxonomy/phylogenetic	Integrated Taxonomic Information System
Wikipedia	taxonomy/phylogenetic	iPhylo

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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov